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Motivation: Building and iterating machine learning models is often a resource-intensive process. In biomedical research, scientific codebases can lack scalability and are not easily transferable to work beyond what they were intended.…

Machine Learning · Computer Science 2025-04-03 Khoa A. Tran , John V. Pearson , Nicola Waddell

Quantum machine learning (QML) is a promising early use case for quantum computing. There has been progress in the last five years from theoretical studies and numerical simulations to proof of concepts. Use cases demonstrated on…

Quantum Physics · Physics 2024-04-30 Daniel Goldsmith , M M Hassan Mahmud

Language models (LMs) are machine learning models designed to predict linguistic patterns by estimating the probability of word sequences based on large-scale datasets, such as text. LMs have a wide range of applications in natural language…

This paper presents a comprehensive evaluation of cost-efficient Large Language Models (LLMs) for diverse biomedical tasks spanning both text and image modalities. We evaluated a range of closed-source and open-source LLMs on tasks such as…

Computation and Language · Computer Science 2025-07-21 Israt Jahan , Md Tahmid Rahman Laskar , Chun Peng , Jimmy Huang

Open Modification Search (OMS) is a promising algorithm for mass spectrometry analysis that enables the discovery of modified peptides. However, OMS encounters challenges as it exponentially extends the search scope. Existing OMS…

Hardware Architecture · Computer Science 2024-11-15 Keming Fan , Wei-Chen Chen , Sumukh Pinge , H. -S. Philip Wong , Tajana Rosing

The fine-tuning of open-source large language models (LLMs) for machine translation has recently received considerable attention, marking a shift towards data-centric research from traditional neural machine translation. However, the area…

Computation and Language · Computer Science 2024-10-28 Yongjing Yin , Jiali Zeng , Yafu Li , Fandong Meng , Yue Zhang

Machine learning (ML) is a subfield of artificial intelligence. The term applies broadly to a collection of computational algorithms and techniques that train systems from raw data rather than a priori models. ML techniques are now…

We propose a methodology at the nexus of operations research and machine learning (ML) leveraging generic approximators available from ML to accelerate the solution of mixed-integer linear two-stage stochastic programs. We aim at solving…

Optimization and Control · Mathematics 2022-06-14 Eric Larsen , Emma Frejinger , Bernard Gendron , Andrea Lodi

Machine learning (ML) algorithms are showing a growing trend in helping the scientific communities across different disciplines and institutions to address large and diverse data problems. However, many available ML tools are…

Machine Learning Interatomic Potentials (MLIP) are a novel in silico approach for molecular property prediction, creating an alternative to disrupt the accuracy/speed trade-off of empirical force fields and density functional theory (DFT).…

Large language models (LLMs) are central to modern natural language processing, delivering exceptional performance in various tasks. However, their substantial computational and memory requirements present challenges, especially for devices…

The reproduction of state-of-the-art multimodal LLM pre-training faces barriers at every stage of the pipeline, including high-quality data filtering, multimodal data mixture strategies, sequence packing techniques, and training frameworks.…

Computation and Language · Computer Science 2025-04-03 Weizhi Wang , Yu Tian , Linjie Yang , Heng Wang , Xifeng Yan

Leveraging machine-learning (ML) techniques for compiler optimizations has been widely studied and explored in academia. However, the adoption of ML in general-purpose, industry strength compilers has yet to happen. We propose MLGO, a…

Programming Languages · Computer Science 2021-01-14 Mircea Trofin , Yundi Qian , Eugene Brevdo , Zinan Lin , Krzysztof Choromanski , David Li

Anomaly detection in computational workflows is critical for ensuring system reliability and security. However, traditional rule-based methods struggle to detect novel anomalies. This paper leverages large language models (LLMs) for…

Software Engineering · Computer Science 2024-07-26 Hongwei Jin , George Papadimitriou , Krishnan Raghavan , Pawel Zuk , Prasanna Balaprakash , Cong Wang , Anirban Mandal , Ewa Deelman

Laser-induced breakdown spectroscopy (LIBS) is a popular, fast elemental analysis technique used to determine the chemical composition of target samples, such as in industrial analysis of metals or in space exploration. Recently, there has…

Machine Learning · Computer Science 2021-04-10 Kshitij Bhardwaj , Maya Gokhale

Masked diffusion models (MDMs) have shown promise in language modeling, yet their scalability and effectiveness in core language tasks, such as text generation and language understanding, remain underexplored. This paper establishes the…

Artificial Intelligence · Computer Science 2025-03-03 Shen Nie , Fengqi Zhu , Chao Du , Tianyu Pang , Qian Liu , Guangtao Zeng , Min Lin , Chongxuan Li

Many mechanical engineering applications call for multiscale computational modeling and simulation. However, solving for complex multiscale systems remains computationally onerous due to the high dimensionality of the solution space.…

Machine Learning · Computer Science 2023-03-23 Phong C. H. Nguyen , Joseph B. Choi , H. S. Udaykumar , Stephen Baek

Matrix-matrix multiplication is a fundamental operation of great importance to scientific computing and, increasingly, machine learning. It is a simple enough concept to be introduced in a typical high school algebra course yet in practice…

Mathematical Software · Computer Science 2016-09-02 Jianyu Huang , Robert A. van de Geijn

Large language models (LLMs) demonstrate strong mathematical reasoning, but reliance on closed-source APIs for OR tasks raises privacy concerns, and training open-source models from scratch incurs high compute costs. We introduce…

Artificial Intelligence · Computer Science 2025-10-03 Jianzhang Zhang , Jialong Zhou , Chuang Liu

Large language models (LLM) are advanced AI systems trained on extensive textual data, leveraging deep learning techniques to understand and generate human-like language. Today's LLMs with billions of parameters are so huge that hardly any…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-10-14 Sheikh Azizul Hakim , Saem Hasan
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