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We present a novel method to explicitly incorporate topological prior knowledge into deep learning based segmentation, which is, to our knowledge, the first work to do so. Our method uses the concept of persistent homology, a tool from…

Computer Vision and Pattern Recognition · Computer Science 2019-01-30 James R. Clough , Ilkay Oksuz , Nicholas Byrne , Julia A. Schnabel , Andrew P. King

Spatial transcriptomics studies are becoming increasingly large and commonplace, necessitating simultaneous analysis of a large number of spatially resolved variables. Correspondingly, a diverse range of methodologies have been proposed to…

Quantitative Methods · Quantitative Biology 2025-09-09 James Boyle , Gregory Hamm , Eleanor Williams , Robin JG Hartman , Magnus Soderburg , Ian Henry , Michael Casey

Geometric alignment appears in a variety of applications, ranging from domain adaptation, optimal transport, and normalizing flows in machine learning; optical flow and learned augmentation in computer vision and deformable registration…

Computer Vision and Pattern Recognition · Computer Science 2021-10-27 Steffen Czolbe , Aasa Feragen , Oswin Krause

Topological data analysis involves the statistical characterization of the shape of data. Persistent homology is a primary tool of topological data analysis, which can be used to analyze topological features and perform statistical…

Methodology · Statistics 2023-03-01 Chul Moon , Nicole A. Lazar

The signature of a path, introduced by K.T. Chen [5] in $1954$, has been extensively studied in recent years. The $2010$ paper [12] of Hambly and Lyons showed that the signature is injective on the space of continuous finite-variation paths…

Classical Analysis and ODEs · Mathematics 2022-06-30 Thomas Cass , William F. Turner

Topological methods are very rarely used in structural health monitoring (SHM), or indeed in structural dynamics generally, especially when considering the structure and topology of observed data. Topological methods can provide a way of…

Human-Computer Interaction · Computer Science 2022-09-14 Tristan Gowdridge , Nikolaos Dervilis , Keith Worden

Persistent topological properties of an image serve as an additional descriptor providing an insight that might not be discovered by traditional neural networks. The existing research in this area focuses primarily on efficiently…

Computer Vision and Pattern Recognition · Computer Science 2023-03-07 Ekaterina Khramtsova , Guido Zuccon , Xi Wang , Mahsa Baktashmotlagh

Understanding and predicting thermal transport in disordered materials remains a significant challenge due to the absence of periodicity and the complex nature of medium-range structural motifs. In this work, we investigate amorphous…

Materials Science · Physics 2025-12-16 Kosuke Yamazaki , Takuma Shiga , Kumpei Shiraishi , Emi Minamitani

We propose a statistical framework to identify topological differences in two populations of random geometric objects. The proposed framework involves first associating a topological signature with random geometric objects and then…

Methodology · Statistics 2026-03-17 Satish Kumar , Subhra Sankar Dhar

Topological data analysis is a powerful tool for describing topological signatures in real world data. An important challenge in topological data analysis is matching significant topological signals across distinct systems. In geometry and…

Algebraic Topology · Mathematics 2025-02-19 Stephen Y Zhang , Michael P H Stumpf , Tom Needham , Agnese Barbensi

Living systems exhibit complex yet organized behavior on multiple spatiotemporal scales. To investigate the nature of multiscale coordination in living systems, one needs a meaningful and systematic way to quantify the complex dynamics, a…

Adaptation and Self-Organizing Systems · Physics 2020-03-11 Mengsen Zhang , William D. Kalies , J. A. Scott Kelso , Emmanuelle Tognoli

Gait recognition aims to distinguish different walking patterns by analyzing video-level human silhouettes, rather than relying on appearance information. Previous research on gait recognition has primarily focused on extracting local or…

Computer Vision and Pattern Recognition · Computer Science 2023-07-26 Qian Wu , Ruixuan Xiao , Kaixin Xu , Jingcheng Ni , Boxun Li , Ziyao Xu

Human gait or walking manner is a biometric feature that allows identification of a person when other biometric features such as the face or iris are not visible. In this paper, we present a new pose-based convolutional neural network model…

Computer Vision and Pattern Recognition · Computer Science 2018-02-09 Anna Sokolova , Anton Konushin

The problem of (point) forecasting $ \textit{univariate} $ time series is considered. Most approaches, ranging from traditional statistical methods to recent learning-based techniques with neural networks, directly operate on raw time…

Machine Learning · Computer Science 2021-07-21 Sebastian Zeng , Florian Graf , Christoph Hofer , Roland Kwitt

We propose a practical computational framework for detecting structural changes in parameter-dependent topological data. In many applications, such as time-series data analysis, anomaly detection, and monitoring of systems under changing…

Algebraic Topology · Mathematics 2026-05-28 Satoshi Kanno , Rei Nishimura , Hiroshi Yamauchi , Yoshi-aki Shimada

In this paper, a novel signature of human action recognition, namely the curvature of a video sequence, is introduced. In this way, the distribution of sequential data is modeled, which enables few-shot learning. Instead of depending on…

Computer Vision and Pattern Recognition · Computer Science 2019-06-18 He Chen , Gregory S. Chirikjian

Network centrality measures play a crucial role in understanding graph structures, assessing the importance of nodes, paths, or cycles based on directed or reciprocal interactions encoded by vertices and edges. Estrada and Ross extended…

Computational Geometry · Computer Science 2024-04-26 John Rick D. Manzanares , Paul Samuel P. Ignacio

We characterize structures such as monotonicity, convexity, and modality in smooth regression curves using persistent homology. Persistent homology is a key tool in topological data analysis that detects higher-dimensional topological…

Algebraic Topology · Mathematics 2025-10-28 Satish Kumar , Subhra Sankar Dhar

In topological data analysis, persistent homology is used to study the "shape of data". Persistent homology computations are completely characterized by a set of intervals called a bar code. It is often said that the long intervals…

Computational Geometry · Computer Science 2025-02-19 Peter Bubenik , Michael Hull , Dhruv Patel , Benjamin Whittle

Building upon findings in computational model of handwriting learning and execution, we introduce the concept of stability to explain the difference between the actual movements performed during multiple execution of the subject's…

Computer Vision and Pattern Recognition · Computer Science 2024-05-21 Antonio Parziale , Moises Diaz , Miguel A. Ferrer , Angelo Marcelli