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We consider adaptive group testing in the linear regime, where the number of defective items scales linearly with the number of items. We analyse an algorithm based on generalized binary splitting. Provided fewer than half the items are…

Information Theory · Computer Science 2020-04-07 Matthew Aldridge

We study the problem of determining exactly the number of defective items in an adaptive Group testing by using a minimum number of tests. We improve the existing algorithm and prove a lower bound that shows that the number of tests in our…

Information Theory · Computer Science 2020-01-03 Nader H. Bshouty , Catherine A. Haddad-Zaknoon , Raghd Boulos , Foad Moalem , Jalal Nada , Elias Noufi , Yara Zaknoon

Consider a very large (infinite) population of items, where each item independent from the others is defective with probability p, or good with probability q=1-p. The goal is to identify N good items as quickly as possible. The following…

Other Statistics · Statistics 2018-04-17 Yaakov Malinovsky

Pathogenic infections pose a significant threat to global health, affecting millions of people every year and presenting substantial challenges to healthcare systems worldwide. Efficient and timely testing plays a critical role in disease…

Quantitative Methods · Quantitative Biology 2023-08-03 Ananthan Nambiar , Chao Pan , Vishal Rana , Mahdi Cheraghchi , João Ribeiro , Sergei Maslov , Olgica Milenkovic

In the pooled data problem, the goal is to identify the categories associated with a large collection of items via a sequence of pooled tests. Each pooled test reveals the number of items in the pool belonging to each category. A prominent…

Information Theory · Computer Science 2025-09-09 Nelvin Tan , Pablo Pascual Cobo , Ramji Venkataramanan

We consider the problem of detecting a small subset of defective items from a large set via non-adaptive "random pooling" group tests. We consider both the case when the measurements are noiseless, and the case when the measurements are…

Information Theory · Computer Science 2011-07-25 Chun Lam Chan , Pak Hou Che , Sidharth Jaggi , Venkatesh Saligrama

The group testing problem consists of determining a small set of defective items from a larger set of items based on a number of possibly-noisy tests, and is relevant in applications such as medical testing, communication protocols, pattern…

Information Theory · Computer Science 2023-09-19 Jonathan Scarlett , Oliver Johnson

Combinatorial pooling schemes have enabled the measurement of thousands of experiments in a small number of reactions. This efficiency is achieved by distributing the items to be measured across multiple reaction units called pools.…

Information Theory · Computer Science 2025-02-13 Guanchen He , Vasilisa A. Kovaleva , Carl Barton , Paul G. Thomas , Mikhail V. Pogorelyy , Hannah V. Meyer , Qin Huang

We consider a generalization of group testing where the potentially contaminated sets are the members of a given hypergraph ${\cal F}=(V,E)$. This generalization finds application in contexts where contaminations can be conditioned by some…

Data Structures and Algorithms · Computer Science 2023-11-28 Annalisa De Bonis

We explore the problem of deriving a posteriori probabilities of being defective for the members of a population in the non-adaptive group testing framework. Both noiseless and noisy testing models are addressed. The technique, which relies…

Information Theory · Computer Science 2021-02-11 Gianluigi Liva , Enrico Paolini , Marco Chiani

In Group Testing, the objective is to identify $K$ defective items out of $N$, $K\ll N$, by testing pools of items together and using the least amount of tests possible. Recently, a fast decoding method based on binary splitting (Price and…

Information Theory · Computer Science 2025-01-23 Xiaxin Li , Arya Mazumdar

The group testing problem consists of determining a small set of defective items from a larger set of items based on a number of possibly-noisy tests, and is relevant in applications such as medical testing, communication protocols, pattern…

Information Theory · Computer Science 2018-10-05 Jonathan Scarlett

We introduce a novel probabilistic group testing framework, termed Poisson group testing, in which the number of defectives follows a right-truncated Poisson distribution. The Poisson model has a number of new applications, including…

Information Theory · Computer Science 2023-07-19 Amin Emad , Olgica Milenkovic

Detection of defective members of large populations has been widely studied in the statistics community under the name "group testing", a problem which dates back to World War II when it was suggested for syphilis screening. There the main…

Information Theory · Computer Science 2009-09-28 Mahdi Cheraghchi , Ali Hormati , Amin Karbasi , Martin Vetterli

This paper deals with an abstraction of a unified problem of drug discovery and pathogen identification. Pathogen identification involves identification of disease-causing biomolecules. Drug discovery involves finding chemical compounds,…

Information Theory · Computer Science 2015-08-18 Abhinav Ganesan , Sidharth Jaggi , Venkatesh Saligrama

We study the group test for DNA library screening based on probabilistic approach. Group test is a method of detecting a few positive items from among a large number of items, and has wide range of applications. In DNA library screening,…

Computation · Statistics 2010-04-27 Takafumi Kanamori , Hiroaki Uehara , Masakazu Jimbo

Recent advances in noiseless non-adaptive group testing have led to a precise asymptotic characterization of the number of tests required for high-probability recovery in the sublinear regime $k = n^{\theta}$ (with $\theta \in (0,1)$), with…

Data Structures and Algorithms · Computer Science 2021-12-24 Oliver Gebhard , Max Hahn-Klimroth , Olaf Parczyk , Manuel Penschuck , Maurice Rolvien , Jonathan Scarlett , Nelvin Tan

Group testing (GT) is the art of identifying binary signals and the marketplace for exchanging new ideas for related fields such as unique-element counting, compressed sensing, traitor tracing, and geno-typing. A GT scheme can be…

Information Theory · Computer Science 2024-05-28 Hsin-Po Wang , Venkatesan Guruswami

We study the problem usually referred to as group testing in the context of COVID-19. Given $n$ samples taken from patients, how should we select mixtures of samples to be tested, so as to maximize information and minimize the number of…

Methodology · Statistics 2020-05-14 Louis Abraham , Gary Bécigneul , Bernhard Schölkopf

Given $n$ items with at most $d$ of which being positive, instead of testing these items individually, the theory of combinatorial group testing aims to identify all positive items using as few tests as possible. This paper is devoted to a…

Information Theory · Computer Science 2016-10-26 Chong Shangguan , Gennian Ge
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