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Response time-delay is an ubiquitous phenomenon in biological systems. Here we use a simple stochastic population model with time-delayed switching-rate conversion to quantitatively study the biological influence of the response time-delay…

Populations and Evolution · Quantitative Biology 2009-04-14 Xiao chuan Xue , Jinhua Zhao , Fei Liu , Zhong-can Ou-Yang

We consider a periodic quantum clock based on cooperative resonance fluorescence at zero temperature. In the quantum case, this system has an exact steady state and the limit cycle appears in conditional quantum dynamics under homodyne…

Quantum Physics · Physics 2025-03-18 Varinder Singh , Euijoon Kwon , G J Milburn

Feedback alignment and related weight-transport-free algorithms are often proposed as biologically plausible alternatives to backpropagation, yet they are typically formulated in discrete phases with implicitly synchronized forward and…

Machine Learning · Computer Science 2026-03-03 Marc Gong Bacvanski , Liu Ziyin , Tomaso Poggio

Interactions in nature can be described by their coupling strength, direction of coupling and coupling function. The coupling strength and directionality are relatively well understood and studied, at least for two interacting systems,…

Adaptation and Self-Organizing Systems · Physics 2017-02-09 Tomislav Stankovski

Living systems continuously transform matter and energy through the chemical processes that constitute their metabolism. The overall metabolic rate of an organism correlates positively with its body mass, however both the exact scaling…

Soft Condensed Matter · Physics 2026-03-19 Efe Ilker , Michael Hinczewski , Xingbo Yang , Frank Jülicher

We present an algorithm to detect the time and frequency difference of independent clocks based on observation of time-correlated photon pairs. This enables remote coincidence identification in entanglement-based quantum key distribution…

Quantum Physics · Physics 2009-05-17 Caleb Ho , Antia Lamas-Linares , Christian Kurtsiefer

As automation and mobile robotics reshape work environments, rising expectations for productivity increase cognitive demands on human operators, leading to potential stress and cognitive overload. Accurately assessing an operator's mental…

Robotics · Computer Science 2025-04-10 Till Aust , Julian Kaduk , Heiko Hamann

In this paper, we analyze the two-node joint clock synchronization and ranging problem. We focus on the case of nodes that employ time-to-digital converters to determine the range between them precisely. This specific design choice leads to…

Systems and Control · Electrical Eng. & Systems 2020-03-03 Pol del Aguila Pla , Lissy Pellaco , Satyam Dwivedi , Peter Händel , Joakim Jaldén

Statistical estimation theory determines the optimal way of estimating parameters of a fluctuating noisy signal. However, if the estimation is performed on unreliable hardware, a sub-optimal estimation procedure can outperform the…

Statistical Mechanics · Physics 2017-09-28 Weerapat Pittayakanchit , Zhiyue Lu , Justin Chew , Michael J. Rust , Arvind Murugan

Adaptation to environmental change is a common property of biological systems. Cells initially respond to external changes in the environment, but after some time, they regain their original state. By considering an element consisting of…

Biological Physics · Physics 2015-05-13 Masayo Inoue , Kunihiko Kaneko

Cells rely on the ability to sense and respond to small spatial differences in chemoattractant concentrations for survival. There is growing evidence that this is accomplished by setting the signaling system near the threshold for…

Cell Behavior · Quantitative Biology 2022-05-19 Debojyoti Biswas , Parijat Banerjee , Pablo A. Iglesias

The response of ecosystems to perturbations is considered from a thermodynamic perspective by acknowledging that, as for all macroscopic systems and processes, the dynamics and stability of ecosystems is subject to definite thermodynamic…

Biological Physics · Physics 2008-09-26 K. Michaelian , V. Alonso Chavez

We describe a method to enhance the sensitivity of precision measurements that takes advantage of a quantum sensor's environment to amplify its response to weak external perturbations. An individual qubit is used to sense the dynamics of…

Quantum Physics · Physics 2013-05-29 G. Goldstein , P. Cappellaro , J. R. Maze , J. S. Hodges , L. Jiang , A. S. Sørensen , M. D. Lukin

Rhythmic data are ubiquitous in the life sciences. Biologists need reliable statistical tests to identify whether a particular experimental treatment has caused a significant change in a rhythmic signal. When these signals display…

Living systems adapt to various environmental conditions by changing their internal states. Inspired by gene expression and epigenetic modification dynamics, we herein propose a generic mechanism for adaptation by combining fast oscillatory…

Quantitative Methods · Quantitative Biology 2022-09-23 Yuuki Matsushita , Kunihiko Kaneko

Spontaneous synchronization between coupled periodic systems occur in a wealth of classical physical setups. Here, we show theoretically that the phase of two distinct quantum harmonic oscillators spontaneously when they are strongly…

Quantum Physics · Physics 2019-09-04 Loic Henriet

Daylight plays a major role in the wake/sleep cycle in humans. Indeed, the wake/sleep system stems from biological systems that follow a circadian rhythm determined by the light/dark alternation. The oscillations can be modeled by the…

Biological Physics · Physics 2022-01-13 F. L. Tsafack Tayong , R. Yamapi , G. Filatrella

The suprachiasmatic nucleus (SCN), also known as the circadian master clock, consists of a large population of oscillator neurons. Together, these neurons produce a coherent signal that drives the body's circadian rhythms. What properties…

Neurons and Cognition · Quantitative Biology 2023-01-04 Stéphanie M. C. Abo , José A. Carrillo , Anita T. Layton

This paper introduces a novel approach to quantifying ecological resilience in biological systems, particularly focusing on noisy systems responding to episodic disturbances with sudden adaptations. Incorporating concepts from…

Quantitative Methods · Quantitative Biology 2024-12-24 Jorge M. Ramirez , Juan M. Restrepo , Valerio Lucarini , David Weston

We introduce a new logic called Signal Convolution Logic (SCL) that combines temporal logic with convolutional filters from digital signal processing. SCL enables to reason about the percentage of time a formula is satisfied in a bounded…

Logic in Computer Science · Computer Science 2018-09-18 Simone Silvetti , Laura Nenzi , Ezio Bartocci , Luca Bortolussi
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