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Over the past few decades, tremendous progress has been made in the development of particle-based discrete simulation methods versus the conventional continuum-based methods. In particular, the lattice Boltzmann (LB) method has evolved from…

Computational Physics · Physics 2015-12-08 Qing Li , K. H. Luo , Q. J. Kang , Y. L. He , Q. Chen , Q. Liu

Interlocking brick assemblies provide a standardized yet challenging testbed for contact-rich and long-horizon robotic manipulation, but existing rigid-body simulators do not faithfully capture snap-fit mechanics. We present BrickSim, the…

Robotics · Computer Science 2026-03-18 Haowei Wen , Ruixuan Liu , Weiyi Piao , Siyu Li , Changliu Liu

In this paper we present a massively parallel open source solver for Richards equation, named the RichardsFOAM solver. This solver has been developed in the framework of the open source generalist computational fluid dynamics tool box…

Computational Engineering, Finance, and Science · Computer Science 2018-10-01 L. Orgogozo , N. Renon , C. Soulaine , F. Hénon , S. K. Tomer , D. Labat , O. S. Pokrovsky , M. Sekhar , R. Ababou , M. Quintard

We present FabSim, a toolkit developed to simplify a range of computational tasks for researchers in diverse disciplines. FabSim is flexible, adaptable, and allows users to perform a wide range of tasks with ease. It also provides a…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-09-21 Derek Groen , Agastya Bhati , James Suter , James Hetherington , Stefan Zasada , Peter Coveney

In this work, we present a multi-fidelity, physics-informed framework for tritium fuel cycle modelling based on the open-source PathSim/PathView platform. Three complementary modelling approaches are demonstrated within a unified dynamic…

Modelling river physical processes is of critical importance for flood protection, river management and restoration of riverine environments. Developments in algorithms and computational power have led to a wider spread of river simulation…

This paper presents the UGSim, a simulator for buoyancy-driven gliders, with a LQR control strategy, and a recursive guidance system. Building on the top of the DAVE and the UUVsim, it is designed to address unique challenges that come from…

Robotics · Computer Science 2025-01-30 Zhizun Xu , Yang Song , Jiabao Zhu , Weichao Shi

In the paper a bridge functional for the closure relation of the three-dimensional reference interaction model (3DRISM) equations is proposed. The effectiveness of the bridge for the aqueous solutions of the carbon nanomaterials is tested.…

Statistical Mechanics · Physics 2011-12-06 Volodymyr P. Sergiievskyi

Many cytoskeletal systems are now sufficiently well known to permit their precise quantitative modelling. Microtubule and actin filaments are well characterized, and the associated proteins are often known, as well as their abundance and…

Quantitative Methods · Quantitative Biology 2022-05-30 Carlos A. Lugo , Eashan Saikia , Francois Nedelec

It is proposed a dimensional Lattice Boltzmann Method (LBM) of wide application for simulating fluid flow and heat transfer problems. The proposed LBM consists in the numerical solution of the discrete lattice Boltzmann equation (LBE) using…

Fluid Dynamics · Physics 2024-05-14 Ivan Talão Martins , Pablo Fariñas Alvariño , Luben Cabezas-Gómez

GeoChemFoam is an open-source OpenFOAM-based numerical modelling toolbox that includes a range of custom packages to solve complex flow processes including multiphase transport with interface transfer, single-phase flow in multiscale porous…

Fluid Dynamics · Physics 2021-10-08 Julien Maes , Hannah P. Menke

Biofilms are communities of microorganisms that grow on virtually all surfaces with sufficient nutrients including aquatic and industrial water systems and medical devices. Biofilms are complex, structured communities where the interplay of…

Biological Physics · Physics 2023-07-13 Mark Owkes , Kai Coblentza , Austen Erikssona , Takumi Kammerzella , Philip S. Stewart

The study of multiphase flows in porous media is fundamental to various fields, including oil recovery, CO2 sequestration, hydrogeology, and others. Accurate predictions of fluid behavior in these systems can enhance process efficiency…

Fluid Dynamics · Physics 2025-09-17 Roberto Lange , Gabriel M. Magalhães , Franciane F. Rocha , Hélio R. Neto

Machine learning (ML) is increasingly becoming a common tool in computational chemistry. At the same time, the rapid development of ML methods requires a flexible software framework for designing custom workflows. MLatom 3 is a program…

A multi-relaxation-time discrete Boltzmann model (DBM) with split collision is proposed for both subsonic and supersonic compressible reacting flows, where chemical reactions take place among various components. The physical model is based…

Statistical Mechanics · Physics 2024-04-23 Chuandong Lin , Kai H. Luo , Huilin Lai

The transport industry has recently shown significant interest in unmanned surface vehicles (USVs), specifically for port and inland waterway transport. These systems can improve operational efficiency and safety, which is especially…

Robotics · Computer Science 2026-04-22 Bavo Lesy , Siemen Herremans , Robin Kerstens , Jan Steckel , Walter Daems , Siegfried Mercelis , Ali Anwar

We present TDS Simulator, a new software tool aimed at modelling thermal desorption spectroscopy (TDS) experiments. TDS is a widely used technique for quantifying key characteristics of hydrogen-material interactions, such as diffusivity…

Computational Engineering, Finance, and Science · Computer Science 2024-11-05 E. García-Macías , Z. D. Harris , E. Martínez-Pañeda

Development of applications related to closed-loop control requires either testing on the field or on a realistic simulator, with the latter being more convenient, inexpensive, safe, and leading to shorter development cycles. To address…

A new lattice Boltzmann model (LBM) is presented to describe chemically reacting multicomponent fluid flow in homogenised porous media. In this work, towards further generalizing the multicomponent reactive lattice Boltzmann model, we…

Fluid Dynamics · Physics 2024-09-06 Nilesh Sawant , Ilya Karlin

The Python package fluidsim is introduced in this article as an extensible framework for Computational Fluid Mechanics (CFD) solvers. It is developed as a part of FluidDyn project (Augier et al., 2018), an effort to promote open-source and…

Computational Engineering, Finance, and Science · Computer Science 2019-07-31 Ashwin Vishnu Mohanan , Cyrille Bonamy , Miguel Calpe Linares , Pierre Augier