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Error-correcting codes are a method for representing data, so that one can recover the original information even if some parts of it were corrupted. The basic idea, which dates back to the revolutionary work of Shannon and Hamming about a…

Information Theory · Computer Science 2026-03-05 Mrinal Kumar , Noga Ron-Zewi

Many high dimensional vector distances tend to a constant. This is typically considered a negative "contrast-loss" phenomenon that hinders clustering and other machine learning techniques. We reinterpret "contrast-loss" as a blessing.…

Computer Vision and Pattern Recognition · Computer Science 2018-04-10 Wen-Yan Lin , Siying Liu , Jian-Huang Lai , Yasuyuki Matsushita

Large-scale distributed storage systems typically use erasure codes to provide durability of data in the face of failures. A set of $k$ blocks to be stored is encoded using an $[n, k]$ code to generate $n$ blocks that are then stored on…

Information Theory · Computer Science 2019-07-31 Francisco Maturana , K. V. Rashmi

Noisy shuffling channels capture the main characteristics of DNA storage systems where distinct segments of data are received out of order, after being corrupted by substitution errors. For realistic schemes with short-length segments,…

Information Theory · Computer Science 2024-10-07 Javad Haghighat , Tolga M. Duman

Document clustering is an unsupervised approach in which a large collection of documents (corpus) is subdivided into smaller, meaningful, identifiable, and verifiable sub-groups (clusters). Meaningful representation of documents and…

Information Retrieval · Computer Science 2014-12-08 Muhammad Rafi , Farnaz Amin , Mohammad Shahid Shaikh

Clustering high-dimensional datasets is hard because interpoint distances become less informative in high-dimensional spaces. We present a clustering algorithm that performs nonlinear dimensionality reduction and clustering jointly. The…

Machine Learning · Computer Science 2018-03-06 Sohil Atul Shah , Vladlen Koltun

We address the problem of un-supervised soft-clustering called micro-clustering. The aim of the problem is to enumerate all groups composed of records strongly related to each other, while standard clustering methods separate records at…

Data Structures and Algorithms · Computer Science 2016-06-07 Takeaki Uno , Hiroki Maegawa , Takanobu Nakahara , Yukinobu Hamuro , Ryo Yoshinaka , Makoto Tatsuta

The primary goal in cluster analysis is to discover natural groupings of objects. The field of cluster analysis is crowded with diverse methods that make special assumptions about data and address different scientific aims. Despite its…

Genomics · Quantitative Biology 2018-06-07 Gary K. Chen , Eric Chi , John Ranola , Kenneth Lange

Heterogeneous Distributed Storage Systems (DSSs) are close to the real world applications for data storage. Each node of the considered DSS, may store different number of packets and each having different repair bandwidth with uniform…

Information Theory · Computer Science 2016-07-22 Krishna Gopal Benerjee , Manish K. Gupta

A new class of exact-repair regenerating codes is constructed by combining two layers of erasure correction codes together with combinatorial block designs, e.g., Steiner systems, balanced incomplete block designs and t-designs. The…

Information Theory · Computer Science 2013-02-20 Chao Tian , Vaneet Aggarwal , Vinay A. Vaishampayan

Analyses of targeted genomic sequencing data from next-generation-sequencing (NGS) technologies typically involves mapping reads to a reference sequence or clustering reads. For a number of species a reference genome is not available so the…

Genomics · Quantitative Biology 2016-02-16 Raunaq Malhotra , Daniel Elleder , Le Bao , David R Hunter , Raj Acharya , Mary Poss

Cluster analysis is one of the essential tasks in data mining and knowledge discovery. Each type of data poses unique challenges in achieving relatively efficient partitioning of the data into homogeneous groups. While the algorithms for…

Machine Learning · Computer Science 2018-12-11 Ruben A. Gevorgyan , Yenok B. Hakobyan

With rapidly increasing data, clustering algorithms are important tools for data analytics in modern research. They have been successfully applied to a wide range of domains; for instance, bioinformatics, speech recognition, and financial…

Data Structures and Algorithms · Computer Science 2015-12-01 Ka-Chun Wong

DNA storage systems face significant challenges, including insertion, deletion, and substitution (IDS) errors. Therefore, designing effective synchronization codes, i.e., codes capable of correcting IDS errors, is essential for DNA storage…

Information Theory · Computer Science 2025-05-23 Javad Haghighat , Tolga M. Duman

A new class of exact-repair regenerating codes is constructed by stitching together shorter erasure correction codes, where the stitching pattern can be viewed as block designs. The proposed codes have the "help-by-transfer" property where…

Information Theory · Computer Science 2017-08-04 Chao Tian , Birenjith Sasidharan , Vaneet Aggarwal , Vinay A. Vaishampayan , P. Vijay Kumar

Clustering aims to group unlabeled objects based on similarity inherent among them into clusters. It is important for many tasks such as anomaly detection, database sharding, record linkage, and others. Some clustering methods are taken as…

Databases · Computer Science 2024-12-02 Binbin Gu , Saeed Kargar , Faisal Nawab

In this paper, we propose an efficient reliability based segmentation-discarding decoding (SDD) algorithm for short block-length codes. A novel segmentation-discarding technique is proposed along with the stopping rule to significantly…

Information Theory · Computer Science 2019-01-23 Chentao Yue , Mahyar Shirvanimoghaddam , Yonghui Li , Branka Vucetic

Comparing clusterings is central to evaluating unsupervised models, yet the many existing similarity measures can produce widely divergent, sometimes contradictory, evaluations. Clustering similarity measures are typically organized into…

Machine Learning · Statistics 2025-11-06 Alexander J. Gates

Background Nucleotide sequences contain multiple codes responsible for organism's functioning and structure. They can be investigated by various signal processing methods. These techniques are well suited for indication of frequently…

Quantitative Methods · Quantitative Biology 2007-05-23 Simon Kogan

Convolutional codes are constructed, designed and analysed using row and/or block structures of unit algebraic schemes. Infinite series of such codes and of codes with specific properties are derived. Properties are shown algebraically and…

Rings and Algebras · Mathematics 2018-04-04 Ted Hurley
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