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We propose novel algorithms for sequence prediction based on ideas from stringology. These algorithms are time and space efficient and satisfy mistake bounds related to particular stringological complexity measures of the sequence. In this…

Formal Languages and Automata Theory · Computer Science 2026-03-31 Vanessa Kosoy

We consider the NP-complete problem of tracking paths in a graph, first introduced by Banik et. al. [3]. Given an undirected graph with a source $s$ and a destination $t$, find the smallest subset of vertices whose intersection with any…

Discrete Mathematics · Computer Science 2019-10-01 David Eppstein , Michael T. Goodrich , James A. Liu , Pedro Matias

In this paper we present a novel quantum algorithm, namely the quantum grid search algorithm, to solve a special search problem. Suppose $ k $ non-empty buckets are given, such that each bucket contains some marked and some unmarked items.…

Quantum Physics · Physics 2019-09-11 Alok Shukla , Prakash Vedula

In the classic Minimum Bisection problem we are given as input a graph $G$ and an integer $k$. The task is to determine whether there is a partition of $V(G)$ into two parts $A$ and $B$ such that $||A|-|B|| \leq 1$ and there are at most $k$…

Data Structures and Algorithms · Computer Science 2014-03-19 Marek Cygan , Daniel Lokshtanov , Marcin Pilipczuk , Michał Pilipczuk , Saket Saurabh

In p-median location interdiction the aim is to find a subset of edges in a graph, such that the objective value of the p-median problem in the same graph without the selected edges is as large as possible. We prove that this problem is…

Data Structures and Algorithms · Computer Science 2023-02-01 Lena Leiß , Till Heller , Luca E. Schäfer , Manuel Streicher , Stefan Ruzika

The lower and the upper irredundance numbers of a graph $G$, denoted $ir(G)$ and $IR(G)$ respectively, are conceptually linked to domination and independence numbers and have numerous relations to other graph parameters. It is a…

Counting the number of homomorphisms of a pattern graph H in a large input graph G is a fundamental problem in computer science. There are myriad applications of this problem in databases, graph algorithms, and network science. Often, we…

Data Structures and Algorithms · Computer Science 2024-09-25 Daniel Paul-Pena , C. Seshadhri

The question whether there exists a hypergraph whose degrees are equal to a given sequence of integers is a well-known reconstruction problem in graph theory, which is motivated by discrete tomography. In this paper we approach the problem…

Combinatorics · Mathematics 2024-02-08 Michela Ascolese , Matthias Lienau , Matthias Schulte , Anusch Taraz

This paper deals with the problem of preventive maintenance (PM) scheduling of pipelines subject to external corrosion defects. The preventive maintenance strategy involves an inspection step at some epoch, together with a repair schedule.…

Data Structures and Algorithms · Computer Science 2016-10-06 Assia Boumahdaf , Michel Broniatowski

The hidden subgroup problem~(HSP) is one of the most important problems in quantum computation. Many problems for which quantum algorithm achieves exponential speedup over its classical counterparts can be reduced to the Abelian HSP.…

Quantum Physics · Physics 2023-05-05 Hefeng Wang

The minimum rank problem is to determine for a graph $G$ the smallest rank of a Hermitian (or real symmetric) matrix whose off-diagonal zero-nonzero pattern is that of the adjacency matrix of $G$. Here $G$ is taken to be a circulant graph,…

Combinatorics · Mathematics 2015-11-26 Louis Deaett , Seth A. Meyer

We investigate a fundamental vertex-deletion problem called (Induced) Subgraph Hitting: given a graph $G$ and a set $\mathcal{F}$ of forbidden graphs, the goal is to compute a minimum-sized set $S$ of vertices of $G$ such that $G-S$ does…

Data Structures and Algorithms · Computer Science 2023-12-05 Zdeněk Dvořák , Daniel Lokshtanov , Fahad Panolan , Saket Saurabh , Jie Xue , Meirav Zehavi

The extension of persistent homology to multi-parameter setups is an algorithmic challenge. Since most computation tasks scale badly with the size of the input complex, an important pre-processing step consists of simplifying the input…

Algebraic Topology · Mathematics 2019-03-19 Ulderico Fugacci , Michael Kerber

A graph H is a vertex-minor of a graph G if it can be reached from G by the successive application of local complementations and vertex deletions. Vertex-minors have been the subject of intense study in graph theory over the last decades…

Combinatorics · Mathematics 2019-06-14 Axel Dahlberg , Jonas Helsen , Stephanie Wehner

In the Topological Minor Deletion (TM-Deletion) problem input consists of an undirected graph $G$, a family of undirected graphs ${\cal F}$ and an integer $k$. The task is to determine whether $G$ contains a set of vertices $S$ of size at…

Data Structures and Algorithms · Computer Science 2020-01-08 Fedor V. Fomin , Daniel Lokshtanov , Fahad Panolan , Saket Saurabh , Meirav Zehavi

A {\em dominating set} of a graph $G=(V,E)$ is a subset of vertices $S\subseteq V$ such that every vertex $v\in V\setminus S$ has at least one neighbor in $S$. Finding a dominating set with the minimum cardinality in a connected graph…

Discrete Mathematics · Computer Science 2022-11-23 Frank Hernandez , Ernesto Parra , Jose Maria Sigarreta , Nodari Vakhania

Many combinatorial optimization problems can be formulated as the search for a subgraph that satisfies certain properties and minimizes the total weight. We assume here that the vertices correspond to points in a metric space and can take…

Data Structures and Algorithms · Computer Science 2024-12-25 Marin Bougeret , Jérémy Omer , Michael Poss

In graph modification problems, one is given a graph G and the goal is to apply a minimum number of modification operations (such as edge deletions) to G such that the resulting graph fulfills a certain property. For example, the Cluster…

Data Structures and Algorithms · Computer Science 2016-06-13 Christian Komusiewicz , André Nichterlein , Rolf Niedermeier

The perfect phylogeny is one of the most used models in different areas of computational biology. In this paper we consider the problem of the Persistent Perfect Phylogeny (referred as P-PP) recently introduced to extend the perfect…

Data Structures and Algorithms · Computer Science 2014-05-30 Paola Bonizzoni , Anna Paola Carrieri , Gianluca Della Vedova , Gabriella Trucco

In this paper we present a model exhibiting a new type of continuous-time quantum walk (as a quantum mechanical transport process) on networks, which is described by a non-Hermitian Hamiltonian possessing a real spectrum. We call it…

Quantum Physics · Physics 2015-05-13 S. Salimi , A. Sorouri