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Reproducibility remains a central challenge in machine learning (ML), especially in collaborative eScience projects where teams iterate over data, features, and models. Current ML workflows are often dynamic yet fragmented, relying on…

Machine Learning · Computer Science 2025-06-23 Zhiwei Li , Carl Kesselman , Tran Huy Nguyen , Benjamin Yixing Xu , Kyle Bolo , Kimberley Yu

The machine learning lifecycle extends beyond the deployment stage. Monitoring deployed models is crucial for continued provision of high quality machine learning enabled services. Key areas include model performance and data monitoring,…

Machine Learning · Statistics 2020-07-14 Janis Klaise , Arnaud Van Looveren , Clive Cox , Giovanni Vacanti , Alexandru Coca

Reference management software is a well-known tool for scientific research work. Since the 1980s, it has been the subject of reviews and evaluations in library and information science literature. This paper presents a systematic review of…

Digital Libraries · Computer Science 2016-01-22 Jesús Tramullas , Ana I. Sánchez-Casabón , Piedad Garrido-Picazo

As software projects are very diverse, each software development process must be adjusted to the needs of the project and the corresponding development team. Frequently, we find different methods and practices combined in a so-called hybrid…

Software Engineering · Computer Science 2021-03-19 Jil Klünder , Melanie Busch , Natalie Dehn , Oliver Karras

Complexity is an important characteristic of any business process. The key assumption of much research in Business Process Management is that process complexity has a negative impact on process performance. So far, behavioral studies have…

Other Computer Science · Computer Science 2023-07-13 Maxim Vidgof , Bastian Wurm , Jan Mendling

For over a century, life course researchers have faced a choice between two dominant methodological approaches: qualitative methods that analyze rich data but are constrained to small samples, and quantitative survey-based methods that…

Computation and Language · Computer Science 2025-07-08 Mark D. Verhagen , Benedikt Stroebl , Tiffany Liu , Lydia T. Liu , Matthew J. Salganik

Modeling environmental ecosystems is essential for effective resource management, sustainable development, and understanding complex ecological processes. However, traditional methods frequently struggle with the inherent complexity,…

Machine Learning · Computer Science 2025-03-06 Runlong Yu , Shengyu Chen , Yiqun Xie , Xiaowei Jia

Most empirical studies of networks assume that the network data we are given represent a complete and accurate picture of the nodes and edges in the system of interest, but in real-world situations this is rarely the case. More often the…

Social and Information Networks · Computer Science 2019-01-02 M. E. J. Newman

In recent years, Data Science has become increasingly relevant as a support tool for industry, significantly enhancing decision-making in a way never seen before. In this context, the MLOps discipline emerges as a solution to automate the…

Machine Learning · Computer Science 2024-12-25 Diego Nogare , Ismar Frango Silveira

Multimodal data modeling has emerged as a powerful approach in clinical research, enabling the integration of diverse data types such as imaging, genomics, wearable sensors, and electronic health records. Despite its potential to improve…

Biological organisms adapt to changes by processing informations from different sources, most notably from their ancestors and from their environment. We review an approach to quantify these informations by analyzing mathematical models of…

Populations and Evolution · Quantitative Biology 2016-03-23 Olivier Rivoire

Real-world networks such as the Internet and WWW have many common traits. Until now, hundreds of models were proposed to characterize these traits for understanding the networks. Because different models used very different mechanisms, it…

Social and Information Networks · Computer Science 2014-09-02 Bojin Zheng , Hongrun Wu , Li Kuang , Jun Qin , Wenhua Du , Jianmin Wang , Deyi Li

Nowadays, financial data analysis is becoming increasingly important in the business market. As companies collect more and more data from daily operations, they expect to extract useful knowledge from existing collected data to help make…

Artificial Intelligence · Computer Science 2016-09-13 Fan Cai , Nhien-An Le-Khac , M-T. Kechadi

Modeling and topological analysis of networks in biological and other complex systems, must venture beyond the limited consideration of very few network metrics like degree, betweenness or assortativity. A proper identification of…

Quantitative Methods · Quantitative Biology 2012-09-25 Soumen Roy

Real-world software applications must constantly evolve to remain relevant. This evolution occurs when developing new applications or adapting existing ones to meet new requirements, make corrections, or incorporate future functionality.…

Software Engineering · Computer Science 2023-08-31 Sebastian Hönel

In this paper, a model for understanding the effects of selection using systems- level computational approaches is introduced. A number of concepts and principles essential for understanding the motivation for constructing the model will be…

Populations and Evolution · Quantitative Biology 2009-03-04 Bradly Alicea

The evaluation of supervised machine learning models is a critical stage in the development of reliable predictive systems. Despite the widespread availability of machine learning libraries and automated workflows, model assessment is often…

Machine Learning · Computer Science 2026-04-16 Xuanyan Liu , Ignacio Cabrera Martin , Marcello Trovati , Xiaolong Xu , Nikolaos Polatidis

Motility is an essential factor for an organism's survival and diversification. With the advent of novel single-cell technologies, analytical frameworks and theoretical methods, we can begin to probe the complex lives of microscopic motile…

Ecosystem models are often used to predict the consequences of management decisions in applied ecology, including fisheries management and threatened species conservation. These models are high-dimensional, parameter-rich, and nonlinear,…

Populations and Evolution · Quantitative Biology 2024-01-22 Larissa Lubiana Botelho , Cailan Jeynes-Smith , Sarah Vollert , Michael Bode

A good process model is expected not only to reflect the behavior of the process, but also to be as easy to read and understand as possible. Because preferences vary across different applications, numerous measures provide ways to reflect…

Formal Languages and Automata Theory · Computer Science 2024-08-23 Patrizia Schalk , Adam Burke , Robert Lorenz