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We address the problem of representing dynamic graphs using $k^2$-trees. The $k^2$-tree data structure is one of the succinct data structures proposed for representing static graphs, and binary relations in general. It relies on compact…

Data Structures and Algorithms · Computer Science 2019-12-09 Miguel E. Coimbra , Alexandre P. Francisco , Luís M. S. Russo , Guillermo de Bernardo , Susana Ladra , Gonzalo Navarro

We introduce a dynamic data structure for the compact representation of binary relations $\mathcal{R} \subseteq A \times B$. The data structure is a dynamic variant of the k$^2$-tree, a static compact representation that takes advantage of…

Data Structures and Algorithms · Computer Science 2017-07-11 Nieves R. Brisaboa , Ana Cerdeira-Pena , Guillermo de Bernardo , Gonzalo Navarro

Generating graphs from a target distribution is a significant challenge across many domains, including drug discovery and social network analysis. In this work, we introduce a novel graph generation method leveraging $K^2$-tree…

Machine Learning · Computer Science 2024-03-27 Yunhui Jang , Dongwoo Kim , Sungsoo Ahn

We present a new compact representation to efficiently store and query large RDF datasets in main memory. Our proposal, called BMatrix, is based on the k2-tree, a data structure devised to represent binary matrices in a compressed way, and…

Databases · Computer Science 2020-02-27 Nieves R. Brisaboa , Ana Cerdeira-Pena , Guillermo de Bernardo , Antonio Fariña

We propose a data structure that stores, in a compressed way, object trajectories, which at the same time, allow to efficiently response queries without the need to decompress the data. We use a data structure, called $k^{2}$-tree, to store…

Data Structures and Algorithms · Computer Science 2016-11-18 Guillermo de Bernardo , Ramón Casares , Adrián Gómez-Brandón , José R. Paramá

The representation of binary relations has been intensively studied and many different theoretical and practical representations have been proposed to answer the usual queries in multiple domains. However, ternary relations have not…

Data Structures and Algorithms · Computer Science 2017-07-11 Sandra Alvarez-Garcia , Guillermo de Bernardo , Nieves R. Brisaboa , Gonzalo Navarro

Compact and I/O-efficient data representations play an important role in efficient algorithm design, as memory bandwidth and latency can present a significant performance bottleneck, slowing the computation by orders of magnitude. While…

Data Structures and Algorithms · Computer Science 2018-11-19 Tomáš Gavenčiak , Jakub Tětek

The $k^2$-tree is a compact data structure designed to efficiently store sparse binary matrices by leveraging both sparsity and clustering of nonzero elements. This representation supports efficiently navigational operations and complex…

Data Structures and Algorithms · Computer Science 2025-05-19 Gabriel Carmona , Giovanni Manzini

Temporal graphs represent interactions between entities over time. Deciding whether entities can reach each other through temporal paths is useful for various applications such as in communication networks and epidemiology. Previous works…

Data Structures and Algorithms · Computer Science 2023-08-24 Luiz Fernando Afra Brito , Marcelo Keese Albertini , Bruno Augusto Nassif Travençolo , Gonzalo Navarro

We consider the problem of representing multidimensional data where the domain of each dimension is organized hierarchically, and the queries require summary information at a different node in the hierarchy of each dimension. This is the…

Data Structures and Algorithms · Computer Science 2016-12-14 Nieves R. Brisaboa , Ana Cerdeira-Pena , Narciso López-López , Gonzalo Navarro , Miguel R. Penabad , Fernando Silva-Coira

The availability of graph data with node attributes that can be either discrete or real-valued is constantly increasing. While existing kernel methods are effective techniques for dealing with graphs having discrete node labels, their…

Machine Learning · Computer Science 2024-10-30 Giovanni Da San Martino , Nicolò Navarin , Alessandro Sperduti

While high-level data parallel frameworks, like MapReduce, simplify the design and implementation of large-scale data processing systems, they do not naturally or efficiently support many important data mining and machine learning…

Databases · Computer Science 2012-04-30 Yucheng Low , Joseph Gonzalez , Aapo Kyrola , Danny Bickson , Carlos Guestrin , Joseph M. Hellerstein

Big research efforts have been devoted to efficiently manage spatio-temporal data. However, most works focused on vectorial data, and much less, on raster data. This work presents a new representation for raster data that evolve along time…

Data Structures and Algorithms · Computer Science 2018-10-26 Ana Cerdeira-Pena , Guillermo de Bernardo , Antonio Fariña , Jose R. Parama , Fernando Silva-Coira

The $k^2$-tree is a successful compact representation of binary relations that exhibit sparseness and/or clustering properties. It can be extended to $d$ dimensions, where it is called a $k^d$-tree. The representation boils down to a long…

Data Structures and Algorithms · Computer Science 2019-11-21 Diego Arroyuelo , Guillermo de Bernardo , Travis Gagie , Gonzalo Navarro

The raster model is commonly used for the representation of images in many domains, and is especially useful in Geographic Information Systems (GIS) to store information about continuous variables of the space (elevation, temperature,…

Data Structures and Algorithms · Computer Science 2019-11-20 Nieves R. Brisaboa , Ana Cerdeira-Pena , Guillermo de Bernardo , Gonzalo Navarro , Oscar Pedreira

With the emergence of graph databases, the task of frequent subgraph discovery has been extensively addressed. Although the proposed approaches in the literature have made this task feasible, the number of discovered frequent subgraphs is…

Databases · Computer Science 2013-08-16 Wajdi Dhifli , Mohamed Moussaoui , Rabie Saidi , Engelbert Mephu Nguifo

Analyzing interconnection structures among underlying entities or objects in a dataset through the use of graph analytics has been shown to provide tremendous value in many application domains. However, graphs are not the primary…

Databases · Computer Science 2017-02-14 Konstantinos Xirogiannopoulos , Amol Deshpande

In this paper, we propose the DN-tree that is a data structure to build lossy summaries of the frequent data access patterns of the queries in a distributed graph data management system. These compact representations allow us an efficient…

Graphs are complex objects that do not lend themselves easily to typical learning tasks. Recently, a range of approaches based on graph kernels or graph neural networks have been developed for graph classification and for representation…

Machine Learning · Computer Science 2022-05-19 Chen Cai , Yusu Wang

Binary relations are commonly used in Computer Science for modeling data. In addition to classical representations using matrices or lists, some compressed data structures have recently been proposed to represent binary relations in compact…

Data Structures and Algorithms · Computer Science 2020-02-24 Carlos Quijada-Fuentes , Miguel R. Penabad , Susana Ladra , Gilberto Gutiérrez
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