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We develop some aspects of a general theory of presentations of subshifts by labelled directed graphs, in particular by compact graphs. Also considered are synchronization properties of subshifts that lead to presentations by countable…

Dynamical Systems · Mathematics 2012-09-11 Wolfgang Krieger

Previously, we proposed a physically inspired rule to organize the data points in a sparse yet effective structure, called the in-tree (IT) graph, which is able to capture a wide class of underlying cluster structures in the datasets,…

Computer Vision and Pattern Recognition · Computer Science 2015-06-22 Teng Qiu , Yongjie Li

This paper introduces a data structure, called simplex tree, to represent abstract simplicial complexes of any dimension. All faces of the simplicial complex are explicitly stored in a trie whose nodes are in bijection with the faces of the…

Computational Geometry · Computer Science 2020-01-09 Jean-Daniel Boissonnat , Clément Maria

Querying graph databases has recently received much attention. We propose a new approach to this problem, which balances competing goals of expressive power, language clarity and computational complexity. A distinctive feature of our…

Databases · Computer Science 2017-10-13 Jakub Michaliszyn , Jan Otop , Piotr Wieczorek

We present a dynamic data structure representing a graph G, which allows addition and removal of edges from G and can determine the number of appearances of a graph of a bounded size as an induced subgraph of G. The queries are answered in…

Data Structures and Algorithms · Computer Science 2013-01-04 Zdenek Dvorak , Vojtech Tuma

We present algorithms and experiments for the visualization of directed graphs that focus on displaying their reachability information. Our algorithms are based on the concepts of the path and channel decomposition as proposed in the…

Data Structures and Algorithms · Computer Science 2019-07-29 Panagiotis Lionakis , Giacomo Ortali , Ioannis G. Tollis

Machine learning on graph structured data has attracted much research interest due to its ubiquity in real world data. However, how to efficiently represent graph data in a general way is still an open problem. Traditional methods use…

Machine Learning · Computer Science 2019-11-14 Jiaqi Ma , Qiaozhu Mei

In this article we discuss a data structure, which combines advantages of two different ways for representing graphs: adjacency matrix and collection of adjacency lists. This data structure can fast add and search edges (advantages of…

Data Structures and Algorithms · Computer Science 2009-08-24 Maxim A. Kolosovskiy

Learning useful representations is a key ingredient to the success of modern machine learning. Currently, representation learning mostly relies on embedding data into Euclidean space. However, recent work has shown that data in some domains…

Machine Learning · Computer Science 2019-10-17 Denis Mazur , Vage Egiazarian , Stanislav Morozov , Artem Babenko

Graph representation learning has become a hot research topic due to its powerful nonlinear fitting capability in extracting representative node embeddings. However, for sequential data such as speech signals, most traditional methods…

Sound · Computer Science 2024-05-08 Yingxue Gao , Huan Zhao , Zixing Zhang

In this paper, we propose a generic concurrent directed graph (for shared memory architecture) that is concurrently being updated by threads adding/deleting vertices and edges. The graph is constructed by the composition of the well known…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-11-01 Sathya Peri , Muktikanta Sa , Nandini Singhal

At the intersection of computation and cognitive science, graph theory is utilized as a formalized description of complex relationships and structures. Traditional graph models are often static, lacking dynamic and autonomous behavioral…

Neurons and Cognition · Quantitative Biology 2024-06-11 Hui Wei , Chenyue Feng , Jianning Zhang

Many data-mining applications use dynamic attributed graphs to represent relational information; but due to security and privacy concerns, there is a dearth of available datasets that can be represented as dynamic attributed graphs. Even…

Machine Learning · Computer Science 2022-12-26 Saikat Dey , Sonal Jha , Wu-chun Feng

We introduce graph wedgelets - a tool for data compression on graphs based on the representation of signals by piecewise constant functions on adaptively generated binary graph partitionings. The adaptivity of the partitionings, a key…

Signal Processing · Electrical Eng. & Systems 2022-11-28 Wolfgang Erb

Graph-based RAG methods like GraphRAG have shown promising global understanding of the knowledge base by constructing hierarchical entity graphs. However, they often suffer from inefficiency and rely on manually pre-defined query modes,…

Artificial Intelligence · Computer Science 2025-06-09 Yibo Zhao , Jiapeng Zhu , Ye Guo , Kangkang He , Xiang Li

Motivated by the need to extract knowledge and value from interconnected data, graph analytics on big data is a very active area of research in both industry and academia. To support graph analytics efficiently a large number of in memory…

Compact representations of objects is a common concept in computer science. Automated planning can be viewed as a case of this concept: a planning instance is a compact implicit representation of a graph and the problem is to find a path (a…

Artificial Intelligence · Computer Science 2014-01-24 Christer Bäckström , Peter Jonsson

With the increase of graph size, it becomes difficult or even impossible to visualize graph structures clearly within the limited screen space. Consequently, it is crucial to design effective visual representations for large graphs. In this…

Social and Information Networks · Computer Science 2024-08-30 Hong Zhou , Peifeng Lai , Zhida Sun , Xiangyuan Chen , Yang Chen , Huisi Wu , Yong Wang

Graph-based representations underlie a wide range of scientific problems. Graph connectivity is typically represented as a sparse matrix in the Compressed Sparse Row format. Large-scale graphs rely on distributed storage, allocating…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-12-14 Bruno Magalhaes , Felix Schürmann

A filtration over a simplicial complex $K$ is an ordering of the simplices of $K$ such that all prefixes in the ordering are subcomplexes of $K$. Filtrations are at the core of Persistent Homology, a major tool in Topological Data Analysis.…

Computational Geometry · Computer Science 2018-02-06 Jean-Daniel Boissonnat , Karthik C. S.