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Although algebraic graph theory based models have been widely applied in physical modeling and molecular studies, they are typically incompetent in the analysis and prediction of biomolecular properties when compared with other quantitative…

Biomolecules · Quantitative Biology 2018-12-21 Duc Duy Nguyen , Guo-Wei Wei

Models of epidemics over networks have become popular, as they describe the impact of individual behavior on infection spread. However, they come with high computational complexity, which constitutes a problem in case large-scale scenarios…

Systems and Control · Electrical Eng. & Systems 2026-02-10 Davide Zorzenon , Fabio Molinari , Joerg Raisch

Networks representing many complex systems in nature and society share some common structural properties like heterogeneous degree distributions and strong clustering. Recent research on network geometry has shown that those real networks…

Physics and Society · Physics 2015-09-23 Rodrigo Aldecoa , Chiara Orsini , Dmitri Krioukov

This paper proposes a novel heterogeneous grid convolution that builds a graph-based image representation by exploiting heterogeneity in the image content, enabling adaptive, efficient, and controllable computations in a convolutional…

Computer Vision and Pattern Recognition · Computer Science 2021-04-23 Ryuhei Hamaguchi , Yasutaka Furukawa , Masaki Onishi , Ken Sakurada

Graphical modeling explores dependences among a collection of variables by inferring a graph that encodes pairwise conditional independences. For jointly Gaussian variables, this translates into detecting the support of the precision…

Methodology · Statistics 2018-02-16 Shota Katayama , Hironori Fujisawa , Mathias Drton

Graphical models have been popularly used for capturing conditional independence structure in multivariate data, which are often built upon independent and identically distributed observations, limiting their applicability to complex…

Methodology · Statistics 2025-07-03 Yuwen Wang , Changyu Liu , Xin He , Junhui Wang

We suggest a general oracle-based framework that captures different parallel stochastic optimization settings described by a dependency graph, and derive generic lower bounds in terms of this graph. We then use the framework and derive…

Optimization and Control · Mathematics 2019-02-12 Blake Woodworth , Jialei Wang , Adam Smith , Brendan McMahan , Nathan Srebro

This paper introduces and demonstrates a computational pipeline for the statistical analysis of shape graph datasets, namely geometric networks embedded in 2D or 3D spaces. Unlike traditional abstract graphs, our purpose is not only to…

Machine Learning · Computer Science 2026-02-19 Murad Hossen , Demetrio Labate , Nicolas Charon

Modeling data sharing in GPU programs is a challenging task because of the massive parallelism and complex data sharing patterns provided by GPU architectures. Better GPU caching efficiency can be achieved through careful task scheduling…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-10-04 Lingda Li , Ari B. Hayes , Stephen A. Hackler , Eddy Z. Zhang , Mario Szegedy , Shuaiwen Leon Song

Graphs are widely used to model execution dependencies in applications. In particular, the NP-complete problem of partitioning a graph under constraints receives enormous attention by researchers because of its applicability in…

Data Structures and Algorithms · Computer Science 2017-04-04 Orlando Moreira , Merten Popp , Christian Schulz

Graphical techniques provide a very useful practical device for calculations involving the so-called spin network states, which encode the quantum degrees of freedom of spatial geometry in loop quantum gravity. Graphical calculus of SU(2),…

General Relativity and Quantum Cosmology · Physics 2023-04-04 Emanuele Alesci , Ilkka Mäkinen , Jinsong Yang

Graphical simulations are a cornerstone of modern media and films. But existing software packages are designed to run on HPC nodes, and perform poorly in the computing cloud. These simulations have complex data access patterns over complex…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-06-08 Omid Mashayekhi , Chinmayee Shah , Hang Qu , Andrew Lim , Philip Levis

Accurate electricity demand forecasting is essential for several reasons, especially as the integration of renewable energy sources and the transition to a decentralized network paradigm introduce greater complexity and uncertainty. The…

Machine Learning · Computer Science 2026-05-12 Eloi Campagne , Yvenn Amara-Ouali , Yannig Goude , Argyris Kalogeratos

In this paper, we propose a software abstraction layer to simplify the design and synthesis of whole-body controllers without making any preliminary assumptions on the control law to be implemented. The main advantage of the proposed…

The coarsest approximation of the structure of a complex network, such as the Internet, is a simple undirected unweighted graph. This approximation, however, loses too much detail. In reality, objects represented by vertices and edges in…

Networking and Internet Architecture · Computer Science 2009-11-02 Xenofontas Dimitropoulos , Dmitri Krioukov , Amin Vahdat , George Riley

The GraphBLAS standard (GraphBlas.org) is being developed to bring the potential of matrix based graph algorithms to the broadest possible audience. Mathematically the Graph- BLAS defines a core set of matrix-based graph operations that can…

This paper proposes a novel algorithm for the problem of structural image segmentation through an interactive model-based approach. Interaction is expressed in the model creation, which is done according to user traces drawn over a given…

Computer Vision and Pattern Recognition · Computer Science 2008-05-16 Alexandre Noma , Ana B. V. Graciano , Luis Augusto Consularo , Roberto M. Cesar-Jr , Isabelle Bloch

These notes loosely follow an introductory course on graph complexes, held at Humboldt-Universit\"at zu Berlin in summer 23. Instead of simply typing up my lecture notes I decided to give here an overview over (parts of) the topic (lecture…

Algebraic Topology · Mathematics 2023-12-19 Marko Berghoff

This paper aims to maximize algebraic connectivity of networks via topology design under the presence of constraints and an adversary. We are concerned with three problems. First, we formulate the concave maximization topology design…

Optimization and Control · Mathematics 2017-11-15 Tor Anderson , Chin-Yao Chang , Sonia Martinez

Round-based models are very common message-passing models; combinatorial topology applied to distributed computing provides sweeping results like general lower bounds. We combine both to study the computability of k-set agreement. Among all…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-06-15 Adam Shimi , Armando Castañeda
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