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This paper presents a heterogeneous adaptive mesh refinement (AMR) framework for efficient simulation of moderately stiff reactive problems. This framework features an elaborate subcycling-in-time algorithm along with a specialized…

Computational Physics · Physics 2025-06-04 Yuqi Wang , Yadong Zeng , Ralf Deiterding , Jianhan Liang

We propose a general algorithm for non-conforming adaptive mesh refinement (AMR) of unstructured meshes in high-order finite element codes. Our focus is on h-refinement with a fixed polynomial order. The algorithm handles triangular,…

Numerical Analysis · Computer Science 2019-05-13 Jakub Červený , Veselin Dobrev , Tzanio Kolev

In this work, we bridge standard adaptive mesh refinement and coarsening on scalable octree background meshes and robust unfitted finite element formulations for the automatic and efficient solution of large-scale nonlinear solid mechanics…

Numerical Analysis · Mathematics 2021-09-01 Santiago Badia , Manuel Caicedo , Alberto F. Martín , Javier Principe

We develop a numerical strategy to solve multi-dimensional Poisson equations on dynamically adapted grids for evolutionary problems disclosing propagating fronts. The method is an extension of the multiresolution finite volume scheme used…

Analysis of PDEs · Mathematics 2015-05-12 Max Duarte , Zdenek Bonaventura , Marc Massot , Anne Bourdon

One difficulty in developing numerical methods for hyperbolic systems of conservation laws is the fact that solutions often contain regions where much higher resolution is required than elsewhere in the domain, particularly since the…

Numerical Analysis · Mathematics 2015-11-12 Brisa N. Davis , Randall J. LeVeque

In this article, we present a novel approach for block-structured adaptive mesh refinement (AMR) that is suitable for extreme-scale parallelism. All data structures are designed such that the size of the meta data in each distributed…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-07-24 Florian Schornbaum , Ulrich Rüde

We present a new code, SCALAR, based on the high-resolution hydrodynamics and N-body code RAMSES, to solve the Schr\"odinger equation on adaptive refined meshes. The code is intended to be used to simulate axion or fuzzy dark matter models…

Computational Physics · Physics 2020-09-23 Mattia Mina , David F. Mota , Hans A. Winther

A simulation package employing a Particle in Cell (PIC) method is developed to study the high current beam transport and the dynamics of plasmas. This package includes subroutines those are suited for various planned projects at University…

Accelerator Physics · Physics 2016-06-21 N. Joshi

Implicit time integration is key to robustly simulating stiff materials and large deformations, but its performance is often dominated by repeatedly solving large linear systems. Adaptive coarsening can reduce this cost by concentrating…

Graphics · Computer Science 2026-05-07 Xuan Wang , Zhaofeng Luo , Minchen Li , Taku Komura , Kemeng Huang

In this dissertation, a fully object-oriented, fully relativistic, multi-dimensional Particle-In-Cell code was developed and applied to answer key questions in plasma-based accelerator research. The simulations increase the understanding of…

Computational Physics · Physics 2015-03-03 Roy G. Hemker

When a numerical simulation has to handle a physics problem with a wide range of time-dependent length scales, dynamically adaptive discretizations can be the method of choice. We present a major upgrade to the numerical relativity code…

General Relativity and Quantum Cosmology · Physics 2023-05-31 Sarah Renkhoff , Daniela Cors , David Hilditch , Bernd Brügmann

We present a scalable, parallel implementation of a solver for the solution of a phase-field model for quasi-static brittle fracture. The code is available as open source. Numerical solutions in 2d and 3d with adaptive mesh refinement show…

Numerical Analysis · Mathematics 2018-06-27 Timo Heister , Thomas Wick

We present a 3D finite element solver for the nonlinear Poisson-Nernst-Planck (PNP) equations for electrodiffusion, coupled to the Stokes system of fluid dynamics. The model serves as a building block for the simulation of macromolecule…

Computational Physics · Physics 2017-04-05 Gregor Mitscha-Baude , Andreas Buttinger-Kreuzhuber , Gerhard Tulzer , Clemens Heitzinger

The high computational demands of multiscale modeling necessitate advanced parallel and adaptive strategies. To address this challenge, we introduce an adaptive method that utilizes two microscale models based on an offline database for…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-07-02 Sion Kim , Ezra Kissel , Karel Matous

A solver for the Poisson equation for 1D, 2D and 3D regular grids is presented. The solver applies the convolution theorem in order to efficiently solve the Poisson equation in spectral space over a rectangular computational domain.…

Mathematical Software · Computer Science 2023-01-04 Joseph Saverin

This work delves into solving the two dimensional Poisson problem through the Finite Element Method which is relevant in various physical scenarios including heat conduction, electrostatics, gravity potential, and fluid dynamics. However,…

Numerical Analysis · Mathematics 2024-07-04 Charuka D. Wickramasinghe , Priyanka Ahire

We present a new adaptive resolution technique for efficient particle-based multiscale molecular dynamics (MD) simulations. The presented approach is tailor-made for molecular systems where atomistic resolution is required only in spatially…

Soft Condensed Matter · Physics 2007-05-23 Matej Praprotnik , Luigi Delle Site , Kurt Kremer

We present a matrix-free GPU multigrid preconditioner with algebraically consistent coarsening for solving Poisson equations on adaptive octree grids with irregular domains. Within uniform-resolution regions, the coarsening satisfies the…

Numerical Analysis · Mathematics 2026-04-22 Mengdi Wang , Yuchen Sun , Bo Zhu

Elliptic Partial Differential Equations (PDEs) play a central role in computing the equilibrium conditions of physical problems (heat, gravitation, electrostatics, etc.). Efficient solutions to elliptic PDEs are also relevant to computer…

Graphics · Computer Science 2026-02-13 Zhiyuan Zhang , Amir Vaxman , Stefanos-Aldo Papanicolopulos , Kartic Subr

Pixel- and voxel-based representations of microstructures obtained from tomographic imaging methods is an established standard in computational materials science. The corresponding highly resolved, uniform discretitization in numerical…

Numerical Analysis · Mathematics 2019-08-27 Andreas Fischer , Bernhard Eidel