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In this work, the topologies of networks constructed from time series from an underlying system undergo a period doubling cascade have been explored by means of the prevalence of different motifs using an efficient computational motif…

Chaotic Dynamics · Physics 2014-06-19 Ruoxi Xiang , Michael Small

Let $G$ be a finite tree with root $r$ and associate to the internal vertices of $G$ a collection of transition probabilities for a simple nondegenerate Markov chain. Embedd $G$ into a graph $G^\prime$ constructed by gluing finite linear…

Probability · Mathematics 2007-05-23 Victor de la Pena , Henryk Gzyl , Patrick McDonald

Recent advancements in graph representation learning have shifted attention towards dynamic graphs, which exhibit evolving topologies and features over time. The increased use of such graphs creates a paramount need for generative models…

Machine Learning · Computer Science 2024-12-23 Ryien Hosseini , Filippo Simini , Venkatram Vishwanath , Henry Hoffmann

We give a deterministic algorithm to construct a graph with no loops (a tree or a forest) whose vertices are the points of a d-dimensional stationary Poisson process S, subset of R^d. The algorithm is independent of the origin of…

Probability · Mathematics 2011-11-10 P. A. Ferrari , C. Landim , H. Thorisson

In the past two decades, significant advances have been made in understanding the structural and functional properties of biological networks, via graph-theoretic analysis. In general, most graph-theoretic studies are conducted in the…

Physics and Society · Physics 2013-10-21 Michelle Rudolph-Lilith , Lyle E. Muller

We consider the problem of sampling from a distribution on graphs, specifically when the distribution is defined by an evolving graph model, and consider the time, space and randomness complexities of such samplers. In the standard…

Data Structures and Algorithms · Computer Science 2025-09-03 Guy Even , Reut Levi , Moti Medina , Adi Rosen

The random connection model is a random graph whose vertices are given by the points of a Poisson process and whose edges are obtained by randomly connecting pairs of Poisson points in a position dependent but independent way. We study…

Probability · Mathematics 2018-08-06 Günter Last , Franz Nestmann , Matthias Schulte

The number of observable degrees of freedom is typically limited in experiments. Here, we consider discrete Markov networks in which an observer has access to a few visible transitions and the waiting times between these transitions.…

Statistical Mechanics · Physics 2025-09-26 Alexander M. Maier , Udo Seifert , Jann van der Meer

We analyze a minimal model of a growing network. At each time step, a new vertex is added; then, with probability delta, two vertices are chosen uniformly at random and joined by an undirected edge. This process is repeated for t time…

Statistical Mechanics · Physics 2009-11-07 Duncan S. Callaway , John E. Hopcroft , Jon M. Kleinberg , M. E. J. Newman , Steven H. Strogatz

A wide variety of complex networks (social, biological, information etc.) exhibit local clustering with substantial variation in the clustering coefficient (the probability of neighbors being connected). Existing models of large graphs…

Discrete Mathematics · Computer Science 2017-09-28 Samantha Petti , Santosh Vempala

The problem of predicting links in large networks is an important task in a variety of practical applications, including social sciences, biology and computer security. In this paper, statistical techniques for link prediction based on the…

Applications · Statistics 2021-09-01 Francesco Sanna Passino , Anna S. Bertiger , Joshua C. Neil , Nicholas A. Heard

This paper develops a structural theory of unique shortest paths in real-weighted graphs. Our main goal is to characterize exactly which sets of node sequences, which we call path systems, can be realized as unique shortest paths in a graph…

Data Structures and Algorithms · Computer Science 2018-10-18 Greg Bodwin

It appeared recently that the classical random graph model used to represent real-world complex networks does not capture their main properties. Since then, various attempts have been made to provide accurate models. We study here a model…

Statistical Mechanics · Physics 2021-03-22 Jean-Loup Guillaume , Matthieu Latapy

The switching model is a Markov chain approach to sample graphs with fixed degree sequence uniformly at random. The recently invented Curveball algorithm for bipartite graphs applies several switches simultaneously (`trades'). Here, we…

Combinatorics · Mathematics 2018-07-27 Corrie Jacobien Carstens , Annabell Berger , Giovanni Strona

Many real-world networks of interest are embedded in physical space. We present a new random graph model aiming to reflect the interplay between the geometries of the graph and of the underlying space. The model favors configurations with…

Probability · Mathematics 2017-06-14 Jean-Christophe Mourrat , Daniel Valesin

A random intersection graph is constructed by assigning independently to each vertex a subset of a given set and drawing an edge between two vertices if and only if their respective subsets intersect. In this paper a model is developed in…

Probability · Mathematics 2015-09-24 Maria Deijfen , Willemien Kets

Paths are important structural elements in complex networks because they are finite (unlike walks), related to effective node coverage (minimum spanning trees), and can be understood as being dual to star connectivity. This article…

Physics and Society · Physics 2007-12-05 Luciano da Fontoura Costa

Neural network design has utilized flexible nonlinear processes which can mimic biological systems, but has suffered from a lack of traceability in the resulting network. Graphical probabilistic models ground network design in probabilistic…

Machine Learning · Computer Science 2015-06-19 Kenric P. Nelson , Madalina Barbu , Brian J. Scannell

We study graphs that are formed by independently-positioned needles (i.e., line segments) in the unit square. To mathematically characterize the graph structure, we derive the probability that two line segments intersect and determine…

Soft Condensed Matter · Physics 2020-10-29 Lucas Böttcher

We define the probability structure of a continuous-time time-homogeneous Markov jump process, on a finite graph, that represents the continuous-time counterpart of the so-called Ruelle-Bowen discrete-time random walk. It constitutes the…

Optimization and Control · Mathematics 2018-02-14 Yongxin Chen , Tryphon T. Georgiou , Michele Pavon