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Related papers: Jamming by growth

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Jammed packings of granular materials display complex mechanical response. For example, the ensemble-averaged shear modulus $\left\langle G \right\rangle$ increases as a power-law in pressure $p$ for static packings of soft spherical…

Growth-fragmentation processes model systems of cells that grow continuously over time and then fragment into smaller pieces. Typically, on average, the number of cells in the system exhibits asynchronous exponential growth and, upon…

Probability · Mathematics 2023-06-08 Emma Horton , Alexander R. Watson

Cell division and death can be regulated by the mechanical forces within a tissue. We study the consequences for the stability and roughness of a propagating interface, by analysing a model of mechanically-regulated tissue growth in the…

Biological Physics · Physics 2018-12-12 John J. Williamson , Guillaume Salbreux

Discrete numerical simulations are performed to study the evolution of the micro-structure and the response of a granular packing during successive loading-unloading cycles, consisting of quasi-static rotations in the gravity field between…

Other Condensed Matter · Physics 2010-12-06 Stephanie Deboeuf , Olivier Dauchot , Lydie Staron , Anne Mangeney , Jean-Pierre Vilotte

Proteins fold to a specific functional conformation with a densely packed hydrophobic core that controls their stability. We develop a geometric, yet all-atom model for proteins that explains the universal core packing fraction of…

Soft Condensed Matter · Physics 2025-03-28 Alex T. Grigas , Zhuoyi Liu , Jack A. Logan , Mark D. Shattuck , Corey S. O'Hern

Jamming is ubiquitous in disordered systems, but the critical behavior of jammed solids subjected to active forces or thermal fluctuations remains elusive. In particular, while passive athermal jamming remains mean-field-like in two and…

Soft Condensed Matter · Physics 2024-04-26 Shalabh K. Anand , Chiu Fan Lee , Thibault Bertrand

The spatiotemporal coordination and regulation of cell proliferation is fundamental in many aspects of development and tissue maintenance. Cells have the ability to adapt their division rates in response to mechanical constraints, yet we do…

Quantitative Methods · Quantitative Biology 2024-04-25 Carles Falcó , Daniel J. Cohen , José A. Carrillo , Ruth E. Baker

Biological functions in living cells are controlled by protein interaction and genetic networks. These molecular networks should be dynamically stable against various fluctuations which are inevitable in the living world. In this paper, we…

Molecular Networks · Quantitative Biology 2009-11-13 Yuping Zhang , Minping Qian , Qi Ouyang , Minghua Deng , Fangting Li , Chao Tang

There are two main classes of physics-based models for two-dimensional cellular materials: packings of repulsive disks and the vertex model. These models have several disadvantages. For example, disk interactions are typically a function of…

Soft Condensed Matter · Physics 2018-12-19 Arman Boromand , Alexandra Signoriello , Fangfu Ye , Corey S. O'Hern , Mark D. Shattuck

Biological cells exhibit a hierarchical spatial organization, where various compartments harbor condensates that form by phase separation. Cells can control the emergence of these condensates by affecting compartment size, the amount of the…

Biological Physics · Physics 2025-04-03 Riccardo Rossetto , Gerrit Wellecke , David Zwicker

Cells adapt to different conditions by altering a vast number of components, which is measurable using transcriptome analysis. Given that a cell undergoing steady growth is constrained to sustain each of its internal components, the…

Cell Behavior · Quantitative Biology 2014-07-15 Kunihiko Kaneko , Chikara Furusawa , Tetsuya Yomo

We present an analysis of finite-size effects in jammed packings of N soft, frictionless spheres at zero temperature. There is a 1/N correction to the discrete jump in the contact number at the transition so that jammed packings exist only…

Soft Condensed Matter · Physics 2015-06-04 Carl P. Goodrich , Andrea J. Liu , Sidney R. Nagel

Non-motile elongated bacteria confined in two-dimensional open micro-channels can exhibit collective motion and form dense monolayers with nematic order if the cells proliferate, i.e., grow and divide. Using soft molecular dynamics…

Soft Condensed Matter · Physics 2013-07-25 Sirio Orozco-Fuentes , Denis Boyer

Mechanical stresses stemming from environmental factors are a key determinant of cellular behavior and physiology. Yet, the role of self-induced biomechanical stresses in growing bacterial colonies has remained largely unexplored. Here, we…

Soft Condensed Matter · Physics 2023-11-27 René Wittmann , G. H. Philipp Nguyen , Hartmut Löwen , Fabian J. Schwarzendahl , Anupam Sengupta

We scrutinize the temporally-resolved speed of active cargo transport in living cells, and show intermittent bursting motions. These nonlinear fluctuations follow a scaling law over several decades of time and space, the statistical…

Subcellular Processes · Quantitative Biology 2015-06-16 Bo Wang , James Kuo , Steve Granick

We propose a scaling ansatz for the elastic energy of a system near the critical jamming transition in terms of three relevant fields: the compressive strain $\Delta \phi$ relative to the critical jammed state, the shear strain $\epsilon$,…

Soft Condensed Matter · Physics 2015-10-14 Carl P. Goodrich , Andrea J. Liu , James P. Sethna

We investigate a three-dimensional kinetically-constrained model that exhibits two types of phase transitions at different densities. At the jamming density $ \rho_J $ there is a mixed-order phase transition in which a finite fraction of…

Statistical Mechanics · Physics 2017-06-08 Nimrod Segall , Eial Teomy , Yair Shokef

The jamming transition of soft particles characterized by narrow size distributions has been well studied by physicists. However, polydispersed systems are more relevant to engineering, and the influence of polydispersity on jamming…

Soft Condensed Matter · Physics 2026-03-26 Kuniyasu Saitoh , Brian P. Tighe

A quantum jammed state can be seen as a state where the phase space available to particles shrinks to zero, an interpretation quite accurate in integrable systems, where stable quasiparticles scatter elastically. We consider the integrable…

Statistical Mechanics · Physics 2022-05-11 Kemal Bidzhiev , Maurizio Fagotti , Lenart Zadnik

To maintain a constant cell size, dividing cells have to coordinate cell cycle events with cell growth. This coordination has for long been supposed to rely on the existence of size thresholds determining cell cycle progression [1]. In…

Cell Behavior · Quantitative Biology 2016-11-04 Ilya Soifer , Lydia Robert , Ariel Amir
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