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The beam-ion interaction is a potential limitation of beam performance in electron accelerators, especially where the beam emittance is of a great concern in future ultra-low emittance light source. "Conventionally", the beam instability…

Accelerator Physics · Physics 2020-07-15 Chao Li , Saike Tian , Na Wang , Haisheng Xu

Ion channels are proteins with a hole down the middle embedded in cell membranes. Membranes form insulating structures and the channels through them allow and control the movement of charged particles, spherical ions, mostly Na+, K+, Ca++,…

Biomolecules · Quantitative Biology 2015-05-11 Bob Eisenberg

Fluidic iontronics is emerging as a distinctive platform for implementing neuromorphic circuits, characterized by its reliance on the same aqueous medium and ionic signal carriers as the brain. Drawing upon recent theoretical advancements…

Soft Condensed Matter · Physics 2024-06-03 T. M. Kamsma , E. A. Rossing , C. Spitoni , R. van Roij

The study of selection and gating in potassium channels is a very important issue in modern biology. Indeed such structures are known in all types of cells in all organisms where they play many important functional roles. The mechanism of…

Cell Behavior · Quantitative Biology 2015-05-30 D. Andreucci , D. Bellaveglia , E. N. M. Cirillo , S. Marconi

The standard second-order pseudo-oscillator potential used in many analytical investigations of the properties of ions stored in a Paul trap has serious limitations. In this paper we show that ion-crystal configurations exhibited by 2, 3,…

Atomic Physics · Physics 2016-06-14 V. Ursekar , J. M. Silvester , Y. S. Nam , R. Blümel

Recent advances in nanofluidics have enabled the confinement of water down to a single molecular layer. Such monolayer electrolytes show promise in achieving bio-inspired functionalities through molecular control of ion transport. However,…

Soft Condensed Matter · Physics 2021-09-08 Paul Robin , Nikita Kavokine , Lydéric Bocquet

The process of ion transport through a locust potassium channel is described by means of the Fokker-Planck equation (FPE). The deterministic and stochastic components of the process of switching between various conducting states of the…

Statistical Mechanics · Physics 2009-11-10 M. Ausloos , K. Ivanova , Z. Siwy

We consider a hybrid atom-ion system consisting of a pair of bosons interacting with a single ion in a quasi-one-dimensional trapping geometry. Building upon a model potential for the atom-ion interaction developed in earlier theoretical…

Quantum Physics · Physics 2023-02-14 Daniel J. Bosworth , Maxim Pyzh , Peter Schmelcher

The effect of environmental temperature on neuronal spiking behaviors is investigated by numerically simulating the temperature dependence of spiking threshold of the Hodgkin-Huxley neuron subject to synaptic stimulus. We find that the…

Neurons and Cognition · Quantitative Biology 2009-11-13 Shenbing Kuang , Jiafu Wang , Ting Zeng , Aiyin Cao

The mixed-alkali effect on the cation dynamics in silicate glasses is analyzed via molecular dynamics simulations. Observations suggest a description of the dynamics in terms of stable sites mostly specific to one ionic species. As main…

Materials Science · Physics 2009-11-11 Heiko Lammert , Andreas Heuer

The recent works by the present authors and their collaborator predicted that the real part of heavy-ion optical potentials changes its character from attraction to repulsion around the incident energy per nucleon $E =$ 200 -- 300 MeV/u on…

Nuclear Theory · Physics 2015-06-12 T. Furumoto , Y. Sakuragi

Many types of neurons exhibit spike rate adaptation, mediated by intrinsic slow $\mathrm{K}^+$-currents, which effectively inhibit neuronal responses. How these adaptation currents change the relationship between in-vivo like fluctuating…

Neurons and Cognition · Quantitative Biology 2013-11-08 Josef Ladenbauer , Moritz Augustin , Klaus Obermayer

Potassium ion channels are critical components of biology. They conduct potassium ions across the cell membrane with remarkable speed and selectivity. Understanding how they do this is crucially important for applications in neuroscience,…

Biomolecules · Quantitative Biology 2024-12-02 Timothy T. Duignan

The classical continuum theories fail to describe the ionic transport in Angstrom channels, where conduction deviates from Ohm's law, as attributed to dehydration/self-energy barrier and dissociation of Bjerrum ion-pairs in previous work.…

Soft Condensed Matter · Physics 2023-06-09 Shusong Zhang , Li Fu , Yanbo Xie

Neural activity in the brain of parkinsonian patients is characterized by the intermittently synchronized oscillatory dynamics. This imperfect synchronization, observed in the beta frequency band, is believed to be related to the…

Neurons and Cognition · Quantitative Biology 2013-02-11 Choongseok Park , Leonid Rubchinsky

We performed all-atom molecular dynamics simulations studying the partition of ions and the ionic current through the bacterial porin OmpF and two selected mutants. The study is motivated by new interesting experimental findings concerning…

Materials Science · Physics 2015-05-19 Jordi Faraudo , Carles Calero , Marcel Aguilella-Arzo

We numerically investigate the influence of intrinsic channel noise on the dynamical response of delay-coupling in neuronal systems. The stochastic dynamics of the spiking is modeled within a stochastic modification of the standard…

Biological Physics · Physics 2013-09-23 Xue Ao , Peter Hanggi , Gerhard Schmid

Usually the influence of the quadratic Stark effect on an ion's trapping potential is minuscule and only needs to be considered in atomic clock experiments. In this work we excite a trapped ion to a Rydberg state with polarizability…

Quantum Physics · Physics 2019-10-16 Gerard Higgins , Fabian Pokorny , Chi Zhang , Markus Hennrich

Synchronization is an important collective phenomenon in interacting oscillatory agents. Many functional features of the brain are related to synchronization of neurons. The type of synchronization transition that may occur (explosive vs.…

Disordered Systems and Neural Networks · Physics 2020-03-18 Mahsa Khoshkhou , Afshin Montakhab

The stress generation on pore walls due to the growth of a sodium chloride crystal in a confined aqueous solution is studied from evaporation experiments in microfluidic channels in conjunction with numerical computations of crystal growth.…

Fluid Dynamics · Physics 2018-06-25 A. Naillon , Pierre Joseph , M. Prat
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