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This paper contributes to extending the validity of Lyapunov function PDEs (in-vented by Fang and Gao in [SIAM Journal on Applied Dynamical Systems, 18(2019), pp. 1163-1199]and whose solution is conjectured to be able to behave as a…

Dynamical Systems · Mathematics 2020-05-06 Yafei Lu , Chuanhou Gao

In this paper, we develop a method to generate the Lyapunov function for stability analysis for chemical reaction networks. Based on the Chemical Master Equation, we derive the Lyapunov Function partial differential equations (PDEs), whose…

Dynamical Systems · Mathematics 2020-10-01 Zhou Fang , Chuanhou Gao

We investigate a broad family of chemical reaction networks (CRNs) assigned with mass action kinetics, called complex-balanced-produced-CRNs (CBP-CRNs), which are generated by any given complex balanced mass action system (MAS) and whose…

Dynamical Systems · Mathematics 2019-11-12 Shan Wu , Yafei Lu , Chuanhou Gao

Piecewise-Linear in Rates (PWLR) Lyapunov functions are introduced for a class of Chemical Reaction Networks (CRNs). In addition to their simple structure, these functions are robust with respect to arbitrary monotone reaction rates, of…

Optimization and Control · Mathematics 2016-09-09 M. Ali Al-Radhawi , David Angeli

Reaction networks have been widely used as generic models in diverse areas of applied sciences, such as biology, chemistry, ecology, epidemiology, and computer science. A reaction network incorporating noisy effects is modeled as a…

Molecular Networks · Quantitative Biology 2026-05-12 Chuang Xu

New checkable criteria for persistence of chemical reaction networks are proposed, which extend and complement those obtained by the authors in previous work. The new results allow the consideration of reaction rates which are time-varying,…

Molecular Networks · Quantitative Biology 2009-05-12 David Angeli , Patrick De Leenheer , Eduardo Sontag

We establish that mass conserving single terminal-linkage networks of chemical reactions admit positive steady states regardless of network deficiency and the choice of reaction rate constants. This result holds for closed systems without…

Molecular Networks · Quantitative Biology 2015-03-19 Santiago Akle , Onkar Dalal , Ronan M. T. Fleming , Michael Saunders , Nicole Taheri , Yinyu Ye

We present a framework to transform the problem of finding a Lyapunov function of a Chemical Reaction Network (CRN) in concentration coordinates with arbitrary monotone kinetics into finding a common Lyapunov function for a linear parameter…

Optimization and Control · Mathematics 2017-10-31 M. Ali Al-Radhawi , David Angeli

This paper provides global exponential stabilization results by means of boundary feedback control for 1-D nonlinear unstable reaction-diffusion Partial Differential Equations (PDEs) with nonlinearities of superlinear growth. The class of…

Optimization and Control · Mathematics 2019-03-26 Iasson Karafyllis , Miroslav Krstic

This paper concerns the long-term behavior of population systems, and in particular of chemical reaction systems, modeled by deterministic mass-action kinetics. We approach two important open problems in the field of Chemical Reaction…

Dynamical Systems · Mathematics 2012-03-21 Casian Pantea

A class of chemical reaction networks is described with the property that each positive equilibrium is locally asymptotically stable relative to its stoichiometry class, an invariant subspace on which it lies. The reaction systems treated…

Dynamical Systems · Mathematics 2013-04-11 Pete Donnell , Murad Banaji

Persistency is the property, for differential equations in $\R^n$, that solutions starting in the positive orthant do not approach the boundary. For chemical reactions and population models, this translates into the non-extinction property:…

Molecular Networks · Quantitative Biology 2007-05-23 David Angeli , Patrick De Leenheer , Eduardo Sontag

In this paper, we derive two sufficient conditions to diagnose the persistence of two classes of delayed complex balanced chemical reaction network systems equipped with mass-action kinetics. One class is identified by $\dim…

Dynamical Systems · Mathematics 2019-08-23 Xiaoyu Zhang , Chuanhou Gao

We study the uniform boundedness of solutions to reaction-diffusion systems possessing a Lyapunov-like function and satisfying an {\it intermediate sum condition}. This significantly generalizes the mass dissipation condition in the…

Analysis of PDEs · Mathematics 2020-06-24 Jeff Morgan , Bao Quoc Tang

This work deals with the exponential stabilization of a system of three semilinear parabolic partial differential equations (PDEs), written in a strict feedforward form. The diffusion coefficients are considered distinct and the PDEs are…

Optimization and Control · Mathematics 2023-04-05 Constantinos Kitsos , Rami Katz , Emilia Fridman

For dynamical systems arising from chemical reaction networks, persistence is the property that each species concentration remains positively bounded away from zero, as long as species concentrations were all positive in the beginning. We…

Dynamical Systems · Mathematics 2016-07-29 Michael Marcondes de Freitas , Elisenda Feliu , Carsten Wiuf

We consider the relationship between stationary distributions for stochastic models of reaction systems and Lyapunov functions for their deterministic counterparts. Specifically, we derive the well known Lyapunov function of reaction…

Probability · Mathematics 2015-06-11 David F. Anderson , Gheorghe Craciun , Manoj Gopalkrishnan , Carsten Wiuf

This paper studies the robustness of a PDE backstepping delay-compensated boundary controller for a reaction-diffusion partial differential equation (PDE) with respect to a nominal delay subject to stochastic error disturbance. The…

Optimization and Control · Mathematics 2024-01-22 Dandan Guan , Jie Qi , Mamadou Diagne

Reaction networks are a general framework widely used in modeling diverse phenomena in different science disciplines. The dynamical process of a reaction network endowed with mass-action kinetics is a mass-action system as an ODE defined by…

Dynamical Systems · Mathematics 2025-12-02 Chuang Xu

We present three examples of chemical reaction networks whose ordinary differential equation scaling limit are almost identical and in all cases stable. Nevertheless, the Markov jump processes associated to these reaction networks display…

Probability · Mathematics 2018-10-16 Andrea Agazzi , Jonathan C. Mattingly
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