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Computing has revolutionized the biological sciences over the past several decades, such that virtually all contemporary research in the biosciences utilizes computer programs. The computational advances have come on many fronts, spurred by…

Other Quantitative Biology · Quantitative Biology 2021-08-23 Berk Ekmekci , Charles E. McAnany , Cameron Mura

The web does not only enable new forms of science, it also creates new possibilities to study science and new digital scholarship. This paper brings together multiple perspectives: from individual researchers seeking the best options to…

Digital Libraries · Computer Science 2013-04-23 Christophe Guéret , Tamy Chambers , Linda Reijnhoudt , Frank van der Most , Andrea Scharnhorst

To reproduce eScience, several challenges need to be solved: scientific workflows need to be automated; the involved software versions need to be provided in an unambiguous way; input data needs to be easily accessible; High-Performance…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-01-30 Kessy Abarenkov , Anne Fouilloux , Helmut Neukirchen , Abdulrahman Azab

AI policymakers are responsible for delivering effective governance mechanisms that can provide safe, aligned and trustworthy AI development. However, the information environment offered to policymakers is characterised by an unnecessarily…

Artificial Intelligence · Computer Science 2025-10-14 Israel Mason-Williams , Gabryel Mason-Williams

Reproducibility is a cornerstone of scientific research, enabling independent verification and validation of empirical findings. The topic gained prominence in fields such as psychology and medicine, where concerns about non - replicable…

Machine Learning · Computer Science 2025-08-05 Adil Mukhtar , Michael Hadwiger , Franz Wotawa , Gerald Schweiger

The broad sharing of research data is widely viewed as of critical importance for the speed, quality, accessibility, and integrity of science. Despite increasing efforts to encourage data sharing, both the quality of shared data, and the…

Digital Libraries · Computer Science 2022-08-30 William Dempsey , Ian Foster , Scott Fraser , Carl Kesselman

Over the recent years the importance of numerical experiments has gradually been more recognized. Nonetheless, sufficient documentation of how computational results have been obtained is often not available. Especially in the scientific…

Mathematical Software · Computer Science 2021-05-10 Jörg Fehr , Jan Heiland , Christian Himpe , Jens Saak

Reproducibility and replicability of research findings are central to the scientific integrity of epidemiology. In addition, many research questions require combiningdata from multiple sources to achieve adequate statistical power. However,…

Science has a data management problem, as well as a project management problem. While industrial-grade data science teams have embraced the agile mindset, and adopted or created all kind of tools to create reproducible workflows,…

Computers and Society · Computer Science 2022-07-05 Juan Julián Merelo-Guervós , Mario García-Valdez

Online artificial intelligence (AI) algorithms are an important component of digital health interventions. These online algorithms are designed to continually learn and improve their performance as streaming data is collected on…

Computers and Society · Computer Science 2025-10-29 Susobhan Ghosh , Bhanu T. Gullapalli , Daiqi Gao , Asim Gazi , Anna Trella , Ziping Xu , Kelly Zhang , Susan A. Murphy

Many questions in computational social science rely on datasets assembled from heterogeneous online sources, a process that is often labor-intensive, costly, and difficult to reproduce. Recent advances in large language models enable…

Computation and Language · Computer Science 2026-01-07 Mengyi Sun

As the field of neuroimaging grows, it can be difficult for scientists within the field to gain and maintain a detailed understanding of its ever-changing landscape. While collaboration and citation networks highlight important…

Social and Information Networks · Computer Science 2019-01-24 Jordan D. Dworkin , Russell T. Shinohara , Danielle S. Bassett

One major challenge in science is to make all results potentially reproducible. Thus, along with the raw data, every step from basic processing of the data, evaluation, to the generation of the figures, has to be documented as clearly as…

Graphics · Computer Science 2020-07-31 Richard Gerum

Progress in many domains increasingly benefits from our ability to view the systems through a computational lens, i.e., using computational abstractions of the domains; and our ability to acquire, share, integrate, and analyze disparate…

The construction of large-scale, high-quality datasets is a fundamental prerequisite for developing robust and generalizable foundation models in motor imagery (MI)-based brain-computer interfaces (BCIs). However, EEG signals collected from…

Computational Engineering, Finance, and Science · Computer Science 2025-06-16 Dingkun Liu , Zhu Chen , Dongrui Wu

In the data science courses at the University of British Columbia, we define data science as the study, development and practice of reproducible and auditable processes to obtain insight from data. While reproducibility is core to our…

Computers and Society · Computer Science 2022-07-26 Joel Ostblom , Tiffany Timbers

Deep learning methods have become very popular for the processing of natural images, and were then successfully adapted to the neuroimaging field. As these methods are non-transparent, interpretability methods are needed to validate them…

Computer Vision and Pattern Recognition · Computer Science 2022-04-15 Elina Thibeau-Sutre , Sasha Collin , Ninon Burgos , Olivier Colliot

Security especially in the fields of IoT, industrial automation and critical infrastructure is paramount nowadays and a hot research topic. In order to ensure confidence in research results they need to be reproducible. In the past we…

Hardware Architecture · Computer Science 2024-07-10 Dmytro Petryk , Ievgen Kabin , Peter Langendörfer , Zoya Dyka

Small to medium-scale data science experiments often rely on research software developed ad-hoc by individual scientists or small teams. Often there is no time to make the research software fast, reusable, and open access. The consequence…

Software Engineering · Computer Science 2022-11-10 Moritz Schubotz , Ankit Satpute , Andre Greiner-Petter , Akiko Aizawa , Bela Gipp

Modern scientific fields face the challenge of integrating a wealth of data, analyses, and results. We recently showed that a neglect of this integration can lead to circular analyses and redundant explanations. Here, we help advance…

Neurons and Cognition · Quantitative Biology 2025-08-15 Mika Rubinov
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