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A graph is $k$-degenerate if any induced subgraph has a vertex of degree at most $k$. In this paper we prove new algorithms for cliques and similar structures for these graphs. We design linear time Fixed-Parameter Tractable algorithms for…

Discrete Mathematics · Computer Science 2017-09-21 George Manoussakis

A graph is inductive $k$-independent if there exists and ordering of its vertices $v_{1},...,v_{n}$ such that $\alpha(G[N(v_{i})\cap V_{i}])\leq k $ where $N(v_{i})$ is the neighborhood of $v_{i}$, $V_{i}=\{v_{i},...,v_{n}\}$ and $\alpha$…

Discrete Mathematics · Computer Science 2017-09-21 George Manoussakis

The graph identification problem consists of discovering the interactions among nodes in a network given their state/feature trajectories. This problem is challenging because the behavior of a node is coupled to all the other nodes by the…

Systems and Control · Electrical Eng. & Systems 2023-10-24 Eduardo Sebastian , Thai Duong , Nikolay Atanasov , Eduardo Montijano , Carlos Sagues

Graphlets are defined as k-node connected induced subgraph patterns. For an undirected graph, 3-node graphlets include close triangle and open triangle. When k = 4, there are six types of graphlets, e.g., tailed-triangle and clique are two…

Machine Learning · Computer Science 2018-10-09 Xutong Liu , Yu-Zhen Janice Chen , John C. S. Lui , Konstantin Avrachenkov

Bidimensionality is the most common technique to design subexponential-time parameterized algorithms on special classes of graphs, particularly planar graphs. The core engine behind it is a combinatorial lemma of Robertson, Seymour and…

Data Structures and Algorithms · Computer Science 2019-03-05 Fedor V. Fomin , Daniel Lokshtanov , Fahad Panolan , Saket Saurabh , Meirav Zehavi

A {\em dominating set} of a graph $G=(V,E)$ is a subset of vertices $S\subseteq V$ such that every vertex $v\in V\setminus S$ has at least one neighbor in $S$. Finding a dominating set with the minimum cardinality in a connected graph…

Discrete Mathematics · Computer Science 2022-11-23 Frank Hernandez , Ernesto Parra , Jose Maria Sigarreta , Nodari Vakhania

Inferring graph structure from observations on the nodes is an important and popular network science task. Departing from the more common inference of a single graph and motivated by social and biological networks, we study the problem of…

Machine Learning · Statistics 2020-10-19 Madeline Navarro , Yuhao Wang , Antonio G. Marques , Caroline Uhler , Santiago Segarra

A graph $G = (V,E)$ is $\textit{monopolar}$ if its vertex set admits a partition $V = (C \uplus{} I)$ where $G[C]$ is a $\textit{cluster graph}$ and $I$ is an $\textit{independent set}$ in $G$; this is a \textit{monopolar partition} of $G$.…

Data Structures and Algorithms · Computer Science 2025-07-08 Geevarghese Philip , Shrinidhi Teganahally Sridhara

A subgraph is constructed by using a subset of vertices and edges of a given graph. There exist many graph properties that are hereditary for subgraphs. Hence, researchers from different communities have paid a great deal of attention in…

Combinatorics · Mathematics 2023-06-06 Kai Siong Yow , Ningyi Liao , Siqiang Luo , Reynold Cheng , Chenhao Ma , Xiaolin Han

The index coding problem is concerned with broadcasting encoded information to a collection of receivers in a way that enables each receiver to discover its required data based on its side information, which comprises the data required by…

Data Structures and Algorithms · Computer Science 2024-08-19 Dror Chawin , Ishay Haviv

Motivated by the increasing need for fast processing of large-scale graphs, we study a number of fundamental graph problems in a message-passing model for distributed computing, called $k$-machine model, where we have $k$ machines that…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-02-10 Khalid Hourani , Hartmut Klauck , William K. Moses , Danupon Nanongkai , Gopal Pandurangan , Peter Robinson , Michele Scquizzato

Graphs are widely used to model complicated data semantics in many application domains. In this paper, two novel and efficient algorithms Fast-ON and Fast-P are proposed for solving the subgraph isomorphism problem. The two algorithms are…

Data Structures and Algorithms · Computer Science 2019-04-19 Mosab Hassaan , Karam Gouda

From social science to biology, numerous applications often rely on graphlets for intuitive and meaningful characterization of networks at both the global macro-level as well as the local micro-level. While graphlets have witnessed a…

Social and Information Networks · Computer Science 2016-02-17 Nesreen K. Ahmed , Jennifer Neville , Ryan A. Rossi , Nick Duffield , Theodore L. Willke

Given a graph $G$, the longest path problem asks to compute a simple path of $G$ with the largest number of vertices. This problem is the most natural optimization version of the well known and well studied Hamiltonian path problem, and…

Discrete Mathematics · Computer Science 2010-04-27 George B. Mertzios , Derek G. Corneil

A $k$-motif (or graphlet) is a subgraph on $k$ nodes in a graph or network. Counting of motifs in complex networks has been a well-studied problem in network analysis of various real-word graphs arising from the study of social networks and…

Social and Information Networks · Computer Science 2020-04-02 Taha Sevim , Muhammet Selçuk Güvel , Lale Özkahya

We consider the (exact, minimum) $k$-cut problem: given a graph and an integer $k$, delete a minimum-weight set of edges so that the remaining graph has at least $k$ connected components. This problem is a natural generalization of the…

Data Structures and Algorithms · Computer Science 2019-10-08 Jason Li

We study the complexity of the Graph Isomorphism problem on graph classes that are characterized by a finite number of forbidden induced subgraphs, focusing mostly on the case of two forbidden subgraphs. We show hardness results and develop…

Data Structures and Algorithms · Computer Science 2015-03-20 Stefan Kratsch , Pascal Schweitzer

Twin-width is a graph parameter introduced in the context of first-order model checking, and has since become a central parameter in algorithmic graph theory. While many algorithmic problems become easier on arbitrary classes of bounded…

Combinatorics · Mathematics 2026-01-12 Irene Heinrich , Moritz Lichter , Klara Pakhomenko , Simon Raßmann

This paper looks at the task of network topology inference, where the goal is to learn an unknown graph from nodal observations. One of the novelties of the approach put forth is the consideration of prior information about the density of…

Signal Processing · Electrical Eng. & Systems 2022-07-12 Samuel Rey , T. Mitchell Roddenberry , Santiago Segarra , Antonio G. Marques

The maximum common subtree isomorphism problem asks for the largest possible isomorphism between subtrees of two given input trees. This problem is a natural restriction of the maximum common subgraph problem, which is ${\sf NP}$-hard in…

Data Structures and Algorithms · Computer Science 2016-08-23 Andre Droschinsky , Nils M. Kriege , Petra Mutzel