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Biofilm growth changes many physical properties of porous media such as porosity, permeability and mass transport parameters. The growth depends on various environmental conditions, and in particular, on flow rates. Modeling the evolution…

The design of structures that can yield efficient sound insulation performance is a recurring topic in the acoustic engineering field. Special attention is given to panels, which can be designed using several approaches to achieve…

Applied Physics · Physics 2022-10-25 Vinicius F. Dal Poggetto , Nicola M. Pugno , José Roberto de F. Arruda

Biofilms pose significant problems for engineers in diverse fields, such as marine science, bioenergy, and biomedicine, where effective biofilm control is a long-term goal. The adhesion and surface mechanics of biofilms play crucial roles…

Biological Physics · Physics 2022-12-22 Hanfeng Zhai , Jingjie Yeo

Membrane pores are implicated in several critical functions, including cell fusion and the transport of signaling molecules for intercellular communication. However, these structural features are often difficult to probe directly. Droplet…

Soft Condensed Matter · Physics 2025-11-13 Nivedina A. Sarma , David A. King , Xuefei Wu , Brett A. Helms , Paul D. Ashby , Thomas P. Russell , Ahmad K. Omar

In this article we develop a duality principle and concerning computational method for a structural optimization problem in elasticity. We consider the problem of finding the optimal topology for an elastic solid which minimizes its…

Optimization and Control · Mathematics 2019-11-13 Fabio Botelho , Alexandre Molter

Filamentous bio-materials such as fibrin or collagen networks exhibit an enormous stiffening of their elastic moduli upon large deformations. This pronounced nonlinear behavior stems from a significant separation between the stiffnesses…

Soft Condensed Matter · Physics 2019-05-21 Robbie Rens , Carlos Villarroel , Gustavo Düring , Edan Lerner

3D porous scaffolds based on agarose and nanocrystalline apatite, two structural components that act as a temporary mineralized extracellular matrix, were prepared by the GELPOR3D method. This shaping technology allows the introduction of…

Tissues and Organs · Quantitative Biology 2021-03-18 Juan L. Paris , Nuria Lafuente-Gomez , M. Victoria Cabanas , Jesus Roman , Juan Pena , Maria Vallet-Regi

We derive a mixture theory-based mathematical model of the degradation of a poroelastic solid immersed in a fluid bath. The evolution of the solid's mechanical and transport properties are also modeled. The inspiration for the model is the…

Biological Physics · Physics 2019-12-16 Priyanka Patki , Francesco Costanzo

This paper proposes a computational framework for the design optimization of stable structures under large deformations by incorporating nonlinear buckling constraints. A novel strategy for suppressing spurious buckling modes related to…

Computational Engineering, Finance, and Science · Computer Science 2023-06-07 Guodong Zhang , Kapil Khandelwal , Tong Guo

Uniform flow distribution across parallel channels directly impacts the performance and efficiency of many fluid and energy systems. However, designing efficient flow manifolds that ensure uniform flow distribution remains a challenge. This…

Fluid Dynamics · Physics 2025-10-06 Sanjay Vermani , Nitish Anand

A preliminary iterative 3D meso-scale structural model of the femur was developed, in which bar and shell elements were used to represent trabecular and cortical bone respectively. The cross-sectional areas of the bar elements and the…

Medical Physics · Physics 2012-03-01 Andrew T. M. Phillips

In this paper we present a mixed projection- and density-based topology optimization approach. The aim is to combine the benefits of both parametrizations: the explicit geometric representation provides specific controls on certain design…

Computational Engineering, Finance, and Science · Computer Science 2019-10-09 Nicolò Pollini , Oded Amir

Drug optimization has become increasingly crucial in light of fast-mutating virus strains and drug-resistant cancer cells. Nevertheless, it remains challenging as it necessitates retaining the beneficial properties of the original drug…

Biomolecules · Quantitative Biology 2025-08-12 Xuefeng Liu , Songhao Jiang , Ian Foster , Jinbo Xu , Rick Stevens

The technique presented here identifies tethered mould designs, optimised for growing cultured tissue with very highly-aligned cells. It is based on a microscopic biophysical model for polarised cellular hydrogels. There is an unmet need…

Biological Physics · Physics 2023-06-26 James P. Hague , Allison E. Andrews , Hugh Dickinson

In recent years, new flexible functional materials have attracted increasing interest, but there is a lack of the designing mechanisms of flexibility design with superstructures. In traditional engineering mechanics, the maximum bending…

Soft Condensed Matter · Physics 2023-09-06 Yang Li , Le Zhang , Dehua Wang , Limei Hou , Shanmei Du , Yang Deng , Yanfeng Du , Yingfei Xin , Chongyang Fu , Yan Gu , Xiaoxiong Wang

Tendon-bone enthesis connects tendon and bone, two mechanically dissimilar materials, while effectively minimizing stress concentrations, a capability rarely achieved in engineering materials. Its hierarchical organization and graded…

Soft Condensed Matter · Physics 2026-04-14 Zhangke Yang , Zhaoxu Meng

We propose a novel approach to optimize the design of heterogeneous materials, with the goal of enhancing their effective fracture toughness under mode-I loading. The method employs a Gaussian processes-based Bayesian optimization framework…

Optimization and Control · Mathematics 2023-03-29 Sukhminder Singh , Lukas Pflug , Julia Mergheim , Michael Stingl

Control architectures and autonomy stacks for complex engineering systems are often divided into layers to decompose a complex problem and solution into distinct, manageable sub-problems. To simplify designs, uncertainties are often ignored…

Optimization and Control · Mathematics 2021-12-30 Tyler Summers , Maryam Kamgarpour

We consider an optimization problem related to semi-active damping of vibrating systems. The main problem is to determine the best damping matrix able to minimize influence of the input on the output of the system. We use a minimization…

Dynamical Systems · Mathematics 2017-07-07 Zoran Tomljanović , Christopher Beattie , Serkan Gugercin

Nature has always inspired scientists and engineers to understand the underlying mechanism leading to optimal design in bio-inspired dynamics. This study presents a computational framework for optimizing undulatory swimming profiles using a…

Fluid Dynamics · Physics 2026-04-09 Hamayun Farooq , Imran Akhtar , Muhammad Saif Ullah Khalid , Haris Moazam Sheikh