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Budding from the plasma membrane of the host cell is an indispensable step in the life cycle of the Human Immunodeficiency Virus (HIV), which belongs to a large family of enveloped RNA viruses, retroviruses. Unlike regular enveloped…

Subcellular Processes · Quantitative Biology 2013-05-29 Rui Zhang , Toan T. Nguyen

Slow crack growth in a model of homogenous brittle elastic material is described as a thermal activation process where stress fluctuations allow to overcome a breaking threshold through a series of irreversible steps. We study the case of a…

Statistical Mechanics · Physics 2009-11-10 S. Santucci , L. Vanel , A. Guarino , R. Scorretti , S. Ciliberto

Modeling of wrinkles and folds formation in single and multilayer graphene sheets lying on flat deformable (polymer) substrates has been carried out. It is shown that the deformability of the substrate leads to the appearance of significant…

Mesoscale and Nanoscale Physics · Physics 2024-07-09 Alexander V. Savin

By adding minute concentrations of a high molecular weight polymer, liquid jets or bridges collapsing under the action of surface tension develop a characteristic shape of uniform threads connecting spherical fluid drops. In this paper,…

Materials Science · Physics 2007-05-23 C. Clasen , J. Eggers , M. A. Fontelos , J. Li , G. H. McKinley

Single-file diffusion is a ubiquitous physical process exploited by living and synthetic systems to exchange molecules with their environment. It is paramount quantifying the escape time needed for single files of particles to exit from…

Soft Condensed Matter · Physics 2016-07-25 Emanuele Locatelli , Matteo Pierno , Fulvio Baldovin , Enzo Orlandini , Yizhou Tan , Stefano Pagliara

We present a single, unified, multi-scale model to study the attachment\detachment dynamics of two deforming, near spherical cells, coated with binding ligands and subject to a slow, homogeneous shear flow in a viscous fluid medium. The…

Cell Behavior · Quantitative Biology 2015-04-23 Sarthok Sircar , Anthony J. Roberts

The mechanics of adherent sheets is central to applications ranging from patching a band aid, coating technology, to the breakthrough discovery of peeling graphene flakes using sticky tape. These processes are often hindered by the…

Soft Condensed Matter · Physics 2021-09-01 Twan J. S. Wilting , Martin H. Essink , Hanneke Gelderblom , Jacco H. Snoeijer

Entangled states are ubiquitous amongst fibrous materials, whether naturally occurring (keratin, collagen, DNA) or synthetic (nanotube assemblies, elastane). A key mechanical characteristic of these systems is their ability to reorganise in…

The design of hydrogels that combine mechanical robustness with dynamic reconfigurability remains a fundamental challenge, as increasing crosslink dissociation rates compromise network integrity. This limitation is addressed through the…

Soft Condensed Matter · Physics 2025-08-28 Pierre Le Bourdonnec , Charafeddine Ferkous , Leo Communal , Luca Cipelletti , Rémi Merindol

Graphene nanochannels are relevant for their possible applications, as in water purification, and for the challenge of understanding how they change the properties of confined liquids. Here, we use all-atom molecular dynamics simulations to…

Soft Condensed Matter · Physics 2021-03-25 Carles Calero , Giancarlo Franzese

There is increasing evidence that mammalian cells not only crawl on substrates but can also swim in fluids. To elucidate the mechanisms of the onset of motility of cells in suspension, a model which couples actin and myosin kinetics to…

Biological Physics · Physics 2019-09-18 Alexander Farutin , Jocelyn Etienne , Chaouqi Misbah , Pierre Recho

Using analytic theory, numerical calculation and Langevin dynamics simulation we demonstrate the existence of a first order unraveling transition in the stretching of a polymer chain in a poor solvent. The chain suddenly unravels from a…

Soft Condensed Matter · Physics 2009-11-10 I. R. Cooke , D. R. M. Williams

Blindfolded harbor seals are able to use their uniquely shaped whiskers to track vortex wakes left by moving animals and objects that passed by up to 30 seconds earlier; this is an impressive feat as the flow features they detect may have…

Fluid Dynamics · Physics 2015-01-20 Heather R. Beem , Michael S. Triantafyllou

Usually, the strain-induced softening behaviour observed in the differential modulus $K(T,\gamma)$ of hydrogels has been attributed to the breakage of internal structures of the network, such as the cross-links that bind together the…

Soft Condensed Matter · Physics 2025-01-07 L. K. R. Duarte , L. G. Rizzi

Some euglenids, a family of aquatic unicellular organisms, can develop highly concerted, large-amplitude peristaltic body deformations. This remarkable behaviour has been known for centuries. Yet, its function remains controversial, and is…

Soft Condensed Matter · Physics 2020-05-26 Giovanni Noselli , Alfred Beran , Marino Arroyo , Antonio DeSimone

We present a model for unicellular algal growth as motivated by several experiments implicating the importance of calcium ions and ``loosening'' enzymes in morphogenesis. A growing cell at rest in a diffusive calcium solution is viewed as…

patt-sol · Physics 2009-10-30 Royce Kam , Herbert Levine

Let the interface between two immiscible fluids in a Hele-Shaw cell have, at t=0, a wedge shape. As a wedge is scale-free, the fluid relaxation dynamics are self-similar. We find the dynamic exponent of this self-similar flow and show that…

Fluid Dynamics · Physics 2009-11-11 Omri Gat , Baruch Meerson , Arkady Vilenkin

Rigid superhydrophobic materials have the ability to repel millimetric water drops, in typically 10 ms. Yet, most natural water-repellent materials can be deformed by impacting drops. To test the effect of deformability, we perform impacts…

Soft Condensed Matter · Physics 2018-12-05 Pierre Chantelot , Martin Coux , Christophe Clanet , David Quéré

It is widely known that hydrogels, a class of soft materials made of a polymer chain network, are prone to fatigue failure. To understand the underlying mechanism, here we simulate polymer scission and fatigue initiation in the vicinity of…

Soft Condensed Matter · Physics 2024-06-25 Puyu Cao , Bin Chen , Yi Cao , Huajian Gao

Advancement of nanotechnology has greatly accelerated the miniaturization of mechanical or electronic devices. This work proposes a new nanoscale spring - a graphene nanoribbon-based helicoid (GH) structure by using large-scale molecular…

Materials Science · Physics 2017-09-26 Haifei Zhan , Yingyan Zhang , Chunhui Yang , Gang Zhang , Yuantong Gu
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