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Unlike most synthetic materials, biological materials often stiffen as they are deformed. This nonlinear elastic response, critical for the physiological function of some tissues, has been documented since at least the 19th century, but the…

Soft Condensed Matter · Physics 2009-11-10 Cornelis Storm , Jennifer J. Pastore , Fred C. MacKintosh , Tom C. Lubensky , Paul A. Janmey

Flagellated bacteria are hydrodynamically attracted to rigid walls, yet past work shows a 'hovering' state where they swim stably at a finite height above surfaces. We use numerics and theory to reveal the physical origin of hovering.…

Biological Physics · Physics 2024-09-17 Pyae Hein Htet , Debasish Das , Eric Lauga

Helicases are molecular motors which unwind double-stranded nucleic acids (dsNA) in cells. Many helicases move with directional bias on single-stranded (ss) nucleic acids, and couple their directional translocation to strand separation. A…

Biological Physics · Physics 2007-05-23 M. D. Betterton , Frank Julicher

The method of molecular dynamics and molecular mechanics has been used to numerically simulate the formation of wrinkle systems during compression of a graphene sheet lying on a flat solid substrate. It is shown that under uniaxial…

Mesoscale and Nanoscale Physics · Physics 2024-12-13 Alexander V. Savin , Artem P. Klinov

Recent studies demonstrated that an elastomer containing hygroscopic inclusions absorbs moisture and swell. Here we show that a thin film of such an elastomer bonded to a rigid substrate undergoes morphological instability upon absorption…

Soft Condensed Matter · Physics 2023-03-22 Khulood Al-sakkaf , Monicka Kullappan , Manoj K. Chaudhury

The buckling of elastic bodies is a common phenomenon in the mechanics of solids. Wrinkling of membranes can often be interpreted as buckling under constraints that prohibit large amplitude deformation. We present a combination of analytic…

Soft Condensed Matter · Physics 2007-05-23 A. Concha , J. W. McIver , P. Mellado , D. Clarke , O. Tchernyshyov , R. L. Leheny

The compression of soft elastic matter and biological tissue can lead to creasing, an instability where a surface folds sharply into periodic self-contacts. Intriguingly, the unfolding of the surface upon releasing the strain is usually not…

We present new unconstrained simulations and constrained experiments of a pair of pitching hydrofoils in a leader-follower in-line arrangement. Free-swimming simulations of foils with $matched$ pitching amplitudes show self-organization…

Fluid Dynamics · Physics 2024-10-04 Tianjun Han , Amin Mivehchi , Seyedali Seyedmirzaei Sarraf , Keith W. Moored

We study the periodic buckling patterns that emerge when elastic shells are subjected to geometric confinement. Residual swelling provides access to range of shapes (saddles, rolled sheets, cylinders, and spherical sections) which vary in…

Soft Condensed Matter · Physics 2018-10-12 Lucia Stein-Montalvo , Paul Costa , Matteo Pezzulla , Douglas P. Holmes

Propagation of a viscous fluid beneath an elastic sheet is controlled by local dynamics at the peeling front, in close analogy with the capillary-driven spreading of drops over a precursor film. Here we identify propagation laws for a…

Fluid Dynamics · Physics 2015-06-17 John R. Lister , Gunnar G Peng , Jerome A Neufeld

The mechanical response of cellular materials with spinodal topologies is numerically and experimentally investigated. Spinodal microstructures are generated by the numerical solution of the Cahn-Hilliard equation. Two different topologies…

Materials Science · Physics 2019-04-16 Meng-Ting Hsieh , Bianca Endo , Yunfei Zhang , Jens Bauer , Lorenzo Valdevit

The flexibility of the bacterial flagellar hook is believed to have substantial consequences for microorganism locomotion. Using a simplified model of a rigid flagellum and a flexible hook, we show that the paths of axisymmetric cell bodies…

Biological Physics · Physics 2021-10-28 Zonghao Zou , Wilson Lough , Saverio E. Spagnolie

Three general modes are distinguished in the deformation of a thin shell; these are stretching, drilling, and bending. Of these, the drilling mode is the one more likely to emerge in a soft matter shell (as compared to a hard, structural…

Soft Condensed Matter · Physics 2025-01-29 Andre M. Sonnet , Epifanio G. Virga

We consider the process of convective dissolution in homogeneous and isotropic porous media. The flow is unstable due to the presence of a solute that induces a density difference responsible for driving the flow. The mixing dynamics is…

Fluid Dynamics · Physics 2024-08-02 Marco De Paoli , Christopher J. Howland , Roberto Verzicco , Detlef Lohse

We investigate the phenomena of crater formation and gas release caused by projectile impact on underwater beds, which occurs in many natural, geophysical, and industrial applications. The bed in our experiment is constructed of hydrophobic…

Soft Condensed Matter · Physics 2024-11-20 Satyanu Bhadra , Anit Sane , Akash Ghosh , Shankar Ghosh , Kirti Chandra Sahu

Spiders' webs and gossamer threads are often paraded as paradigms for lightweight structures and outstanding polymers. Probably the most intriguing of all spider silks is the araneid capture thread, covered with tiny glycoprotein glue…

Soft Condensed Matter · Physics 2015-01-06 Hervé Elettro , Sébastien Neukirch , Fritz Vollrath , Arnaud Antkowiak

For nearly a century, researchers have tried to understand the swimming of aquatic animals in terms of a balance between the forward thrust from swimming movements and drag on the body. Prior approaches have failed to provide a separation…

Biopolymers are vital structures for many living organisms; for a variety of bacteria, adhesion polymers play a crucial role for the initiation of colonization. Some bacteria express, on their surface, attachment organelles (pili) that…

Biological Physics · Physics 2014-12-01 Johan Zakrisson , Krister Wiklund , Ove Axner , Magnus Andersson

Flagellated bacteria exploiting helical propulsion are known to swim along circular trajectories near surfaces. Fluid dynamics predicts this circular motion to be clockwise (CW) above a rigid surface (when viewed from inside the fluid) and…

Biological Physics · Physics 2014-07-18 Diego Lopez , Eric Lauga

We consider the unwinding of two lattice polymer strands of length N that are initially wound around each other in a double-helical conformation and evolve through Rouse dynamics. The problem relates to quickly bringing a double-stranded…

Soft Condensed Matter · Physics 2010-10-25 M. Baiesi , G. T. Barkema , E. Carlon , D. Panja