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Generative molecular design has moved from proof-of-concept to real-world applicability, as marked by the surge in very recent papers reporting experimental validation. Key challenges in explainability and sample efficiency present…

Biomolecules · Quantitative Biology 2024-03-05 Jeff Guo , Philippe Schwaller

We consider the question of computing the distribution of a permutation statistics over restricted permutations via enumeration schemes. The restricted permutations are those avoiding sets of vincular patterns (which include both classical…

Combinatorics · Mathematics 2014-01-03 Andrew M. Baxter

Inspired by the definition of modified ascent sequences, we introduce a new class of integer sequences called revised ascent sequences. These sequences are defined as Cayley permutations where each entry is a leftmost occurrence if and only…

Combinatorics · Mathematics 2025-05-09 Robin D. P. Zhou

Using techniques from Poisson approximation, we prove explicit error bounds on the number of permutations that avoid any pattern. Most generally, we bound the total variation distance between the joint distribution of pattern occurrences…

Combinatorics · Mathematics 2023-06-22 Harry Crane , Stephen DeSalvo

Ascent sequences form a central class of combinatorial objects, as they are in bijection with several important families such as (2+2)-free posets, Stoimenow matchings, and other Fishburn objects, and are enumerated by the Fishburn numbers.…

Combinatorics · Mathematics 2026-04-09 Qi Liu , Sergey Kitaev , Philip B. Zhang

Defant and Zheng introduced a consecutive-pattern-avoiding stack sort map $SC_{\sigma}$, where the stack must avoid a consecutive pattern $\sigma$. Seidel and Sun disproved a conjecture in Defant and Zheng's paper about the maximum…

Combinatorics · Mathematics 2026-04-22 Kai Yi

A permutomino of size n is a polyomino determined by a pair of permutations of size n+1, such that they differ in each position. In this paper, after recalling some enumerative results about permutominoes, we give a first algorithm for the…

Combinatorics · Mathematics 2008-10-17 Elisabetta Grazzini , Elisa Pergola , Maddalena Poneti

The structure of order ideals in the Bruhat order for the symmetric group is elucidated via permutation patterns. A method for determining non-isomorphic principal order ideals is described and applied for small lengths. The permutations…

Combinatorics · Mathematics 2007-05-23 Bridget Eileen Tenner

An explanatory model for the emergence of evolvable units must display emerging structures that (1) preserve themselves in time (2) self-reproduce and (3) tolerate a certain amount of variation when reproducing. To tackle this challenge,…

Adaptation and Self-Organizing Systems · Physics 2020-06-22 Germán Kruszewski , Tomas Mikolov

We consider permutations sortable by $k$ passes through a deterministic pop stack. We show that for any $k\in\mathbb N$ the set is characterised by finitely many patterns, answering a question of Claesson and Gu{\dh}mundsson. Our…

Combinatorics · Mathematics 2019-12-17 Murray Elder , Yoong Kuan Goh

A \Def{composition} of a positive integer $n$ is a $k$-tuple $(\l_1, \l_2, \dots, \l_k) \in \Z_{> 0}^k$ such that $n = \l_1 + \l_2 + \dots + \l_k$. Our goal is to enumerate those compositions whose parts $\l_1, \l_2, \dots, \l_k$ avoid a…

Number Theory · Mathematics 2016-05-10 Matthias Beck , Neville Robbins

We modify the enumeration schemes of Zeilberger and Vatter so that they can efficiently enumerate many new classes of pattern-avoiding permutations including all such classes with a regular insertion encoding.

Combinatorics · Mathematics 2019-05-28 Yonah Biers-Ariel

We study generating functions for the number of involutions in $S_n$ avoiding (or containing once) 132, and avoiding (or containing once) an arbitrary permutation $\tau$ on $k$ letters. In several interesting cases the generating function…

Combinatorics · Mathematics 2007-05-23 O. Guibert , T. Mansour

In this paper we propose an algorithm to generate binary words with no more 0's than 1's having a fixed number of 1's and avoiding the pattern $(10)^j1$ for any fixed $j \geq 1$. We will prove that this generation is exhaustive, that is,…

Discrete Mathematics · Computer Science 2012-10-30 Stefano Bilotta , Elisabetta Grazzini , Elisa Pergola , Renzo Pinzani

Mesh patterns are a generalization of classical permutation patterns that encompass classical, bivincular, Bruhat-restricted patterns, and some barred patterns. In this paper, we describe all mesh patterns whose avoidance is coincident with…

Combinatorics · Mathematics 2013-08-28 Bridget Eileen Tenner

We introduce an algorithm for the uniform generation of infinite traces, i.e., infinite words up to commutation of some letters. The algorithm outputs on-the-fly approximations of a theoretical infinite trace, the latter being distributed…

Combinatorics · Mathematics 2025-05-27 Samy Abbes , Vincent Jugé

Deep generative models like GAN and VAE have shown impressive results in generating unconstrained objects like images. However, many design settings arising in industrial design, material science, computer graphics and more require that the…

Machine Learning · Computer Science 2024-06-07 Aaron Ferber , Arman Zharmagambetov , Taoan Huang , Bistra Dilkina , Yuandong Tian

Clustering is a fundamental task in both machine learning and data mining. Among various methods, edge-colored clustering (ECC) has emerged as a useful approach for handling categorical data. Given a hypergraph with (hyper)edges labeled by…

Machine Learning · Computer Science 2025-05-26 Changyeol Lee , Yongho Shin , Hyung-Chan An

We present an standard constraints generation algorithm to find an explicit set whose robustness is equal to the robustness of the feasible solution set of a combinatorial optimization problem with cost uncertainty. Computational experience…

Optimization and Control · Mathematics 2023-04-11 Alejandro Crema

We enumerate and characterize some classes of alternating and reverse alternating involutions avoiding a single pattern of length three or four. If on one hand the case of patterns of length three is trivial, on the other hand, the length…

Combinatorics · Mathematics 2022-09-20 Marilena Barnabei , Flavio Bonetti , Niccolò Castronuovo , Matteo Silimbani
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