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Brain connectivity analysis is now at the foreground of neuroscience research. A connectivity network is characterized by a graph, where nodes represent neural elements such as neurons and brain regions, and links represent statistical…

Methodology · Statistics 2015-11-04 Yin Xia , Lexin Li

In this paper we are going to introduce a new nearest neighbours based approach to clustering, and compare it with previous solutions; the resulting algorithm, which takes inspiration from both DBscan and minimum spanning tree approaches,…

Data Structures and Algorithms · Computer Science 2014-07-14 Marcello La Rocca

The architecture of the brain is too complex to be intuitively surveyable without the use of compressed representations that project its variation into a compact, navigable space. The task is especially challenging with high-dimensional…

Machine Learning · Computer Science 2024-07-12 James K Ruffle , Henry Watkins , Robert J Gray , Harpreet Hyare , Michel Thiebaut de Schotten , Parashkev Nachev

Brightfield and fluorescent imaging of whole brain sections are funda- mental tools of research in mouse brain study. As sectioning and imaging become more efficient, there is an increasing need to automate the post-processing of sec- tions…

Computer Vision and Pattern Recognition · Computer Science 2018-03-12 Yuncong Chen , David Kleinfeld , Martyn Goulding , Yoav Freund

Finding the common structural brain connectivity network for a given population is an open problem, crucial for current neuro-science. Recent evidence suggests there's a tightly connected network shared between humans. Obtaining this…

Neurons and Cognition · Quantitative Biology 2017-01-10 Nahuel Lascano , Guillermo Gallardo , Rachid Deriche , Dorian Mazauric , Demian Wassermann

In this study, we propose a neural network approach to capture the functional connectivities among anatomic brain regions. The suggested approach estimates a set of brain networks, each of which represents the connectivity patterns of a…

Computer Vision and Pattern Recognition · Computer Science 2018-07-24 Baran Baris Kivilcim , Itir Onal Ertugrul , Fatos T. Yarman Vural

Segmentation of brain magnetic resonance images (MRI) is crucial for the analysis of the human brain and diagnosis of various brain disorders. The drawbacks of time-consuming and error-prone manual delineation procedures are aimed to be…

Computer Vision and Pattern Recognition · Computer Science 2022-05-20 Can Taylan Sari , Sila Kurugol , Onur Afacan , Simon K. Warfield

A least squares semi-supervised local clustering algorithm based on the idea of compressed sensing is proposed to extract clusters from a graph with known adjacency matrix. The algorithm is based on a two-stage approach similar to the one…

Machine Learning · Computer Science 2022-11-01 Ming-Jun Lai , Zhaiming Shen

An overarching objective in contemporary statistical network analysis is extracting salient information from datasets consisting of multiple networks. To date, considerable attention has been devoted to node and network clustering, while…

Methodology · Statistics 2025-08-19 Wenlong Jiang , Chris McKennan , Jesús Arroyo , Joshua Cape

Deep clustering has been dominated by flat models, which split a dataset into a predefined number of groups. Although recent methods achieve an extremely high similarity with the ground truth on popular benchmarks, the information contained…

Machine Learning · Computer Science 2023-06-22 Michał Znaleźniak , Przemysław Rola , Patryk Kaszuba , Jacek Tabor , Marek Śmieja

We derive and analyze a generic, recursive algorithm for estimating all splits in a finite cluster tree as well as the corresponding clusters. We further investigate statistical properties of this generic clustering algorithm when it…

Machine Learning · Statistics 2021-11-02 Ingo Steinwart , Bharath K. Sriperumbudur , Philipp Thomann

Traditional clustering methods often perform clustering with low-level indiscriminative representations and ignore relationships between patterns, resulting in slight achievements in the era of deep learning. To handle this problem, we…

Machine Learning · Computer Science 2019-05-07 Jianlong Chang , Yiwen Guo , Lingfeng Wang , Gaofeng Meng , Shiming Xiang , Chunhong Pan

This paper presents a novel graph-based kernel learning approach for connectome analysis. Specifically, we demonstrate how to leverage the naturally available structure within the graph representation to encode prior knowledge in the…

Image and Video Processing · Electrical Eng. & Systems 2022-02-23 Jun Yu , Zhaoming Kong , Aditya Kendre , Hao Peng , Carl Yang , Lichao Sun , Alex Leow , Lifang He

Neuroscientific data analysis has traditionally relied on linear algebra and stochastic process theory. However, the tree-like shapes of neurons cannot be described easily as points in a vector space (the subtraction of two neuronal shapes…

Computer Vision and Pattern Recognition · Computer Science 2020-04-07 Dingkang Wang , Lucas Magee , Bing-Xing Huo , Samik Banerjee , Xu Li , Jaikishan Jayakumar , Meng Kuan Lin , Keerthi Ram , Suyi Wang , Yusu Wang , Partha P. Mitra

Face clustering plays an essential role in exploiting massive unlabeled face data. Recently, graph-based face clustering methods are getting popular for their satisfying performances. However, they usually suffer from excessive memory…

Computer Vision and Pattern Recognition · Computer Science 2022-05-27 Junfu Liu , Di Qiu , Pengfei Yan , Xiaolin Wei

Tools to analyze the latent space of deep neural networks provide a step towards better understanding them. In this work, we motivate sparse subspace clustering (SSC) with an aim to learn affinity graphs from the latent structure of a given…

Machine Learning · Computer Science 2021-07-06 Uday Singh Saini , Pravallika Devineni , Evangelos E. Papalexakis

Face clustering is an essential tool for exploiting the unlabeled face data, and has a wide range of applications including face annotation and retrieval. Recent works show that supervised clustering can result in noticeable performance…

Computer Vision and Pattern Recognition · Computer Science 2020-04-06 Lei Yang , Dapeng Chen , Xiaohang Zhan , Rui Zhao , Chen Change Loy , Dahua Lin

We review clustering as an analysis tool and the underlying concepts from an introductory perspective. What is clustering and how can clusterings be realised programmatically? How can data be represented and prepared for a clustering task?…

Machine Learning · Computer Science 2022-12-05 Jan-Oliver Felix Kapp-Joswig , Bettina G. Keller

Structural connectivity in the brain is typically studied by reducing its observation to a single spatial resolution. However, the brain possesses a rich architecture organized over multiple scales linked to one another. We explored the…

Physics and Society · Physics 2020-09-07 Muhua Zheng , Antoine Allard , Patric Hagmann , Yasser Alemán-Gómez , M. Ángeles Serrano

Given a large unlabeled set of images, how to efficiently and effectively group them into clusters based on extracted visual representations remains a challenging problem. To address this problem, we propose a convolutional neural network…

Computer Vision and Pattern Recognition · Computer Science 2017-08-14 Chih-Chung Hsu , Chia-Wen Lin