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We propose efficient algorithms for two key tasks in the analysis of large nonuniform networks: uniform node sampling and cluster detection. Our sampling technique is based on augmenting a simple, but slowly mixing uniform MCMC sampler with…

Disordered Systems and Neural Networks · Physics 2007-05-23 Pekka Orponen , Satu Elisa Schaeffer

We present cortical surface parcellation using spherical deep convolutional neural networks. Traditional multi-atlas cortical surface parcellation requires inter-subject surface registration using geometric features with high processing…

As the complexity and computational demands of deep learning models rise, the need for effective optimization methods for neural network designs becomes paramount. This work introduces an innovative search mechanism for automatically…

Machine Learning · Computer Science 2024-08-12 Seyedarmin Azizi , Mahdi Nazemi , Arash Fayyazi , Massoud Pedram

We develop an algorithm that finds the consensus of many different clustering solutions of a graph. We formulate the problem as a median set partitioning problem and propose a greedy optimization technique. Unlike other approaches that find…

Information Retrieval · Computer Science 2024-08-22 Md Taufique Hussain , Mahantesh Halappanavar , Samrat Chatterjee , Filippo Radicchi , Santo Fortunato , Ariful Azad

While much of the work in the design of convolutional networks over the last five years has revolved around the empirical investigation of the importance of depth, filter sizes, and number of feature channels, recent studies have shown that…

Machine Learning · Computer Science 2017-12-08 Karim Ahmed , Lorenzo Torresani

This paper introduces a clustering framework for networks with nodes annotated with time-series data. The framework addresses all types of network-clustering problems: State clustering, node clustering within states (a.k.a. topology…

Machine Learning · Computer Science 2020-02-25 Cong Ye , Konstantinos Slavakis , Pratik V. Patil , Johan Nakuci , Sarah F. Muldoon , John Medaglia

We propose a Bayesian framework for uncertainty quantification and comparison in brain connectivity graph analysis. Standard graph-based approaches typically rely on point estimates of correlation matrices, overlooking the uncertainty…

Methodology · Statistics 2026-05-29 Alice Chevaux , Julyan Arbel , Guillaume Kon Kam King , Sophie Achard

Finding a good clustering of vertices in a network, where vertices in the same cluster are more tightly connected than those in different clusters, is a useful, important, and well-studied task. Many clustering algorithms scale well,…

Social and Information Networks · Computer Science 2011-10-18 Thomas DuBois , Jennifer Golbeck , Aravind Srinivasan

In this work, we focus on the efficiency and scalability of pairwise constraint-based active clustering, crucial for processing large-scale data in applications such as data mining, knowledge annotation, and AI model pre-training. Our goals…

Machine Learning · Computer Science 2025-09-11 Wen-Bo Xie , Xun Fu , Bin Chen , Yan-Li Lee , Tao Deng , Tian Zou , Xin Wang , Zhen Liu , Jaideep Srivastavad

Human brain anatomy and function display a combination of modular and hierarchical organization, suggesting the importance of both cohesive structures and variable resolutions in the facilitation of healthy cognitive processes. However,…

Neurons and Cognition · Quantitative Biology 2015-06-18 Christian Lohse , Danielle S. Bassett , Kelvin O. Lim , Jean M. Carlson

The characterisation of the brain as a "connectome", in which the connections are represented by correlational values across timeseries and as summary measures derived from graph theory analyses, has been very popular in the last years.…

Machine Learning · Computer Science 2020-03-13 Tiago Azevedo , Luca Passamonti , Pietro Liò , Nicola Toschi

Brain fiber tracts are widely used in studying brain diseases, which may lead to a better understanding of how disease affects the brain. The segmentation of brain fiber tracts assumed enormous importance in disease analysis. In this paper,…

Neurons and Cognition · Quantitative Biology 2020-11-04 Chaoqing Xu , Guodao Sun , Ronghua Liang , Xiufang Xu

Convex clustering is a well-regarded clustering method, resembling the similar centroid-based approach of Lloyd's $k$-means, without requiring a predefined cluster count. It starts with each data point as its centroid and iteratively merges…

Machine Learning · Statistics 2026-05-15 Shubhayan Pan , Kushal Bose , Debolina Paul , Saptarshi Chakraborty , Swagatam Das

Understanding brain connectivity in a network-theoretic context has shown much promise in recent years. This type of analysis identifies brain organisational principles, bringing a new perspective to neuroscience. At the same time, large…

Neural and Evolutionary Computing · Computer Science 2016-11-28 Sarah Parisot , Jonathan Passerat-Palmbach , Markus D. Schirmer , Boris Gutman

There has been huge interest in studying human brain connectomes inferred from different imaging modalities and exploring their relationship with human traits, such as cognition. Brain connectomes are usually represented as networks, with…

Machine Learning · Statistics 2021-09-14 Meimei Liu , Zhengwu Zhang , David B. Dunson

There is increasing interest in learning a set of small outcome-relevant subgraphs in network-predictor regression. The extracted signal subgraphs can greatly improve the interpretation of the association between the network predictor and…

Methodology · Statistics 2019-03-27 Lu Wang , Zhengwu Zhang , David Dunson

A novel non-parametric estimator of the correlation between grouped measurements of a quantity is proposed in the presence of noise. This work is primarily motivated by functional brain network construction from fMRI data, where brain…

Methodology · Statistics 2023-02-16 Hanâ Lbath , Alexander Petersen , Wendy Meiring , Sophie Achard

The community structure of complex networks reveals both their organization and hidden relationships among their constituents. Most community detection methods currently available are not deterministic, and their results typically depend on…

Physics and Society · Physics 2012-03-29 Andrea Lancichinetti , Santo Fortunato

These days, computational diagnosis strategies of neuropsychiatric disorders are gaining attention day by day. It's critical to determine the brain's functional connectivity based on Functional-Magnetic-Resonance-Imaging(fMRI) to diagnose…

Computer Vision and Pattern Recognition · Computer Science 2022-05-05 Sartaj Ahmed Salman , Zhichao Lian , Marva Saleem , Yuduo Zhang

We present a technique for clustering categorical data by generating many dissimilarity matrices and averaging over them. We begin by demonstrating our technique on low dimensional categorical data and comparing it to several other…

Machine Learning · Statistics 2017-09-20 Saeid Amiri , Bertrand Clarke , Jennifer Clarke