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Given a rooted, binary phylogenetic network and a rooted, binary phylogenetic tree, can the tree be embedded into the network? This problem, called \textsc{Tree Containment}, arises when validating networks constructed by phylogenetic…

Populations and Evolution · Quantitative Biology 2024-02-14 Leo van Iersel , Mark Jones , Mathias Weller

We consider the recently introduced model of \emph{low ply graph drawing}, in which the ply-disks of the vertices do not have many common overlaps, which results in a good distribution of the vertices in the plane. The \emph{ply-disk} of a…

Data Structures and Algorithms · Computer Science 2016-09-05 Patrizio Angelini , Michael A. Bekos , Till Bruckdorfer , Jaroslav Hančl , Michael Kaufmann , Stephen Kobourov , Antonios Symvonis , Pavel Valtr

We investigate isometric embeddings of finite metric trees into $(\mathbb{R}^n,d_{1})$ and $( \mathbb{R}^n, d_{\infty})$. We prove that a finite metric tree can be isometrically embedded into $(\mathbb{R}^n,d_{1})$ if and only if the number…

Metric Geometry · Mathematics 2020-02-06 Asuman Güven Aksoy , Mehmet Kiliç , Sahin Koçak

Given metric spaces $(X,d)$ and $(Y,\rho)$ and an ordering $x_1,x_2,\ldots,x_n$ of $(X,d)$, an embedding $f: X \rightarrow Y$ is said to have a prioritized distortion $\alpha(\cdot)$, if for any pair $x_j,x'$ of distinct points in $X$, the…

Data Structures and Algorithms · Computer Science 2019-07-17 Michael Elkin , Ofer Neiman

Packing graphs is a combinatorial problem where several given graphs are being mapped into a common host graph such that every edge is used at most once. In the planar tree packing problem we are given two trees T1 and T2 on n vertices and…

Computational Geometry · Computer Science 2016-03-28 Markus Geyer , Michael Hoffmann , Michael Kaufmann , Vincent Kusters , Csaba D. Tóth

A vertex of degree one in a tree is called an end vertex and a vertex of degree at least three is called a branch vertex. For a graph $G$, let $\sigma_2$ be the minimum degree sum of two nonadjacent vertices in $G$. We consider tree…

Combinatorics · Mathematics 2015-05-19 Zhora Nikoghosyan

It is known that every graph with n vertices embeds stochastically into trees with distortion $O(\log n)$. In this paper, we show that this upper bound is sharp for a large class of graphs. As this class of graphs contains diamond graphs,…

Combinatorics · Mathematics 2023-06-13 Th. Schlumprecht , Garrett Tresch

Trees without vertices of degree $2$ are sometimes named topological trees. In this work, we bring forward the study of the inducibility of (rooted) topological trees with a given number of leaves. The inducibility of a topological tree $S$…

Combinatorics · Mathematics 2018-02-20 Audace Amen Vioutou Dossou-Olory , Stephan Wagner

We find an orientation of a tree with 20 vertices such that the corresponding fixed-template constraint satisfaction problem (CSP) is NP-complete, and prove that for every orientation of a tree with fewer vertices the corresponding CSP can…

Rings and Algebras · Mathematics 2023-03-28 Manuel Bodirsky , Jakub Bulín , Florian Starke , Michael Wernthaler

A $k$-ranking of a graph $G$ is a labeling of its vertices from $\{1,\ldots,k\}$ such that any nontrivial path whose endpoints have the same label contains a larger label. The least $k$ for which $G$ has a $k$-ranking is the ranking number…

Combinatorics · Mathematics 2014-01-14 Daniel C. McDonald

A split-by-edges tree of a graph G on n vertices is a binary tree T where the root = V(G), every leaf is an independent set in G, and for every other node N in T with children L and R there is a pair of vertices {u, v} in N such that L = N…

Data Structures and Algorithms · Computer Science 2015-05-14 Asbjørn Brændeland

In this paper, we study the problem of finding a minimum weight spanning tree that contains each vertex in a given subset $V_{\rm NT}$ of vertices as an internal vertex. This problem, called Minimum Weight Non-Terminal Spanning Tree,…

Data Structures and Algorithms · Computer Science 2025-01-30 Tesshu Hanaka , Yasuaki Kobayashi

We define a set $P$ to be a branching $k$-path vertex cover of an undirected forest $F$ if all leaves and isolated vertices (vertices of degree at most $1$) of $F$ belong to $P$ and every path on $k$ vertices (of length $k-1$) contains…

Combinatorics · Mathematics 2026-01-07 Mikhail Makarov

In the longest plane spanning tree problem, we are given a finite planar point set $\mathcal{P}$, and our task is to find a plane (i.e., noncrossing) spanning tree for $\mathcal{P}$ with maximum total Euclidean edge length. Despite more…

Computational Geometry · Computer Science 2024-05-02 Sergio Cabello , Michael Hoffmann , Katharina Klost , Wolfgang Mulzer , Josef Tkadlec

The Erd\H{o}s-S\'os Conjecture states that every graph with average degree exceeding $k-1$ contains every tree with $k$ edges as a subgraph. We prove that there are $\delta>0$ and $k_0\in\mathbb N$ such that the conjecture holds for every…

Combinatorics · Mathematics 2025-08-13 Bruce Reed , Maya Stein

A spanning tree of a graph $G$ is a connected acyclic spanning subgraph of $G$. We consider enumeration of spanning trees when $G$ is a $2$-tree, meaning that $G$ is obtained from one edge by iteratively adding a vertex whose neighborhood…

Discrete Mathematics · Computer Science 2016-07-21 P. Renjith , N. Sadagopan , Douglas B. West

A tree T is invertible if and only if T has a perfect matching. Godsil considers an invertible tree T and finds that the inverse of the adjacency matrix of T has entries in {0, 1, -1} and is the signed adjacency matrix of a graph which…

Combinatorics · Mathematics 2018-03-21 Krystal Guo

Ordinal embedding aims at finding a low dimensional representation of objects from a set of constraints of the form "item $j$ is closer to item $i$ than item $k$". Typically, each object is mapped onto a point vector in a low dimensional…

Machine Learning · Computer Science 2021-05-26 Aïssatou Diallo , Johannes Fürnkranz

An L(2, 1)-labeling of a graph is an assignment of nonnegative integers to the vertices of G such that adjacent vertices receive numbers differed by at least 2, and vertices at distance 2 are assigned distinct numbers. The L(2, 1)-labeling…

Combinatorics · Mathematics 2015-09-02 Dong Chen , Wai Chee Shiu , Qiaojun Shu , Pak Kiu Sun , Weifan Wang

Every chordal graph $G$ can be represented as the intersection graph of a collection of subtrees of a host tree, a so-called {\em tree model} of $G$. The leafage $\ell(G)$ of a connected chordal graph $G$ is the minimum number of leaves of…

Discrete Mathematics · Computer Science 2015-10-07 Steven Chaplick , Juraj Stacho
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