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Many biological and neural systems can be seen as networks of interacting periodic processes. Importantly, their functionality depends on the emerging collective dynamics of the network. Synchrony of oscillations is one of the most…

Adaptation and Self-Organizing Systems · Physics 2020-05-29 Christian Bick , Marc Goodfellow , Carlo R. Laing , Erik A. Martens

The dynamic properties of a classical tracer particle in a random, disordered medium are investigated close to the localization transition. For Lorentz models obeying Newtonian and diffusive motion at the microscale, we have performed…

Soft Condensed Matter · Physics 2008-04-29 Felix Höfling , Tobias Munk , Erwin Frey , Thomas Franosch

Locally interacting dynamical systems, such as epidemic spread, rumor propagation through crowd, and forest fire, exhibit complex global dynamics originated from local, relatively simple, and often stochastic interactions between dynamic…

Systems and Control · Electrical Eng. & Systems 2024-05-29 Beomseok Kang , Harshit Kumar , Minah Lee , Biswadeep Chakraborty , Saibal Mukhopadhyay

Most current methods for identifying coherent structures in spatially-extended systems rely on prior information about the form which those structures take. Here we present two new approaches to automatically filter the changing…

Cellular Automata and Lattice Gases · Physics 2011-11-09 Cosma Rohilla Shalizi , Robert Haslinger , Jean-Baptiste Rouquier , Kristina Lisa Klinkner , Cristopher Moore

Understanding principles of neurolocomotion requires the synthesis of neural activity, sensory feedback, and biomechanics. The nematode \textit{C. elegans} is an ideal model organism for studying locomotion in an integrated neuromechanical…

Neurons and Cognition · Quantitative Biology 2021-06-08 Carter L. Johnson , Timothy J. Lewis , Robert D. Guy

Limit cycle oscillations are phenomena arising in nonlinear dynamical systems and characterized by periodic, locally-stable, and self-sustained state trajectories. Systems controlled in a closed loop along a periodic trajectory can also be…

Systems and Control · Electrical Eng. & Systems 2023-03-20 Defne E. Ozan , Mingzhou Yin , Andrea Iannelli , Roy S. Smith

The human brain is a complex dynamical system which displays a wide range of macroscopic and mesoscopic patterns of neural activity, whose mechanistic origin remains poorly understood. Whole-brain modelling allows us to explore candidate…

Neurons and Cognition · Quantitative Biology 2025-04-25 Cristiana Dimulescu , Ronja Strömsdörfer , Agnes Flöel , Klaus Obermayer

Hydrodynamic systems arising in swarming modelling include nonlocal forces in the form of attractive-repulsive potentials as well as pressure terms modelling strong local repulsion. We focus on the case where there is a balance between…

Analysis of PDEs · Mathematics 2018-03-12 José A. Carrillo , Aneta Wróblewska-Kamińska , Ewelina Zatorska

We consider a discrete latent variable model for two-way data arrays, which allows one to simultaneously produce clusters along one of the data dimensions (e.g. exchangeable observational units or features) and contiguous groups, or…

We explore the coupled dynamics of the internal states of a set of interacting elements and the network of interactions among them. Interactions are modeled by a spatial game and the network of interaction links evolves adapting to the…

Other Condensed Matter · Physics 2007-09-23 Martin G. Zimmermann , Victor M. Eguiluz , Maxi San Miguel

Identifying local structural motifs and packing patterns of molecular solids is a challenging task for both simulation and experiment. We demonstrate two novel approaches to characterize local environments in different polymorphs of…

Materials Science · Physics 2024-04-02 Daisuke Kuroshima , Michael Kilgour , Mark E. Tuckerman , Jutta Rogal

We propose the use of a dynamical window to investigate the real-time evolution of quantum many-body systems in a one-dimensional lattice. In a recent paper [H. Phien et al, arxiv:????.????], we introduced infinite boundary conditions (IBC)…

Quantum Physics · Physics 2015-04-01 Ho N. Phien , Guifré Vidal , Ian P. McCulloch

Dynamical systems are ubiquitous in science and engineering as models of phenomena that evolve over time. Although complex dynamical systems tend to have important modular structure, conventional modeling approaches suppress this structure.…

Category Theory · Mathematics 2022-11-04 Sophie Libkind , Andrew Baas , Evan Patterson , James Fairbanks

In this paper, we introduce a data-driven modeling approach for dynamics problems with latent variables. The state-space of the proposed model includes artificial latent variables, in addition to observed variables that can be fitted to a…

Optimization and Control · Mathematics 2024-06-19 Yushuang Luo , Xiantao Li , Wenrui Hao

We study the Hamiltonian dynamics of a many-body quantum system subjected to periodic projective measurements which leads to probabilistic cellular automata dynamics. Given a sequence of measured values, we characterize their dynamics by…

Statistical Mechanics · Physics 2023-10-13 Heitor P. Casagrande , Bo Xing , Marcello Dalmonte , Alex Rodriguez , Vinitha Balachandran , Dario Poletti

We exploit the reduced space of C. elegans postures to develop a novel tracking algorithm which captures both simple shapes and also self-occluding coils, an important, yet unexplored, component of worm behavior. We apply our algorithm to…

Quantitative Methods · Quantitative Biology 2016-11-01 Onno D Broekmans , Jarlath B Rodgers , William S Ryu , Greg J Stephens

A system of coupled oscillators on an arbitrary graph is locally driven by the tendency to mutual synchronization between nearby oscillators, but can and often exhibit nonlinear behavior on the whole graph. Understanding such nonlinear…

Dynamical Systems · Mathematics 2023-11-28 Agam Goyal , Zhaoxing Wu , Richard P. Yim , Binhao Chen , Zihong Xu , Hanbaek Lyu

Reduced motor control is one of the most frequent features associated with aging and disease. Nonlinear and fractal analyses have proved to be useful in investigating human physiological alterations with age and disease. Similar findings…

Quantitative Methods · Quantitative Biology 2017-09-06 Luiz G. A. Alves , Peter B. Winter , Leonardo N. Ferreira , Renée M. Brielmann , Richard I. Morimoto , Luís A. N. Amaral

In this paper, we present a robust adaptive model predictive control (MPC) scheme for linear systems subject to parametric uncertainty and additive disturbances. The proposed approach provides a computationally efficient formulation with…

Systems and Control · Electrical Eng. & Systems 2020-03-12 Johannes Köhler , Elisa Andina , Raffaele Soloperto , Matthias A. Müller , Frank Allgöwer

Key features of biological activity can often be captured by transitions between a finite number of semi-stable states that correspond to behaviors or decisions. We present here a broad class of dynamical systems that are ideal for modeling…

Dynamical Systems · Mathematics 2022-12-14 Megan Morrison , Lai-Sang Young