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Decision trees (DTs) and their random forest (RF) extensions are workhorses of classification and regression in Euclidean spaces. However, algorithms for learning in non-Euclidean spaces are still limited. We extend DT and RF algorithms to…

Machine Learning · Computer Science 2025-06-10 Philippe Chlenski , Quentin Chu , Raiyan R. Khan , Kaizhu Du , Antonio Khalil Moretti , Itsik Pe'er

Gaussian process regression (GPR) or kernel ridge regression is a widely used and powerful tool for nonlinear prediction. Therefore, active learning (AL) for GPR, which actively collects data labels to achieve an accurate prediction with…

To enable personalized cancer treatment, machine learning models have been developed to predict drug response as a function of tumor and drug features. However, most algorithm development efforts have relied on cross validation within a…

Deep Reinforcement Learning (DRL) algorithms have achieved great success in solving many challenging tasks while their black-box nature hinders interpretability and real-world applicability, making it difficult for human experts to…

Machine Learning · Computer Science 2024-10-23 Jingdi Chen , Hanhan Zhou , Yongsheng Mei , Carlee Joe-Wong , Gina Adam , Nathaniel D. Bastian , Tian Lan

This study explores the application and performance of Transformational Machine Learning (TML) in drug discovery. TML, a meta learning algorithm, excels in exploiting common attributes across various domains, thus developing composite…

Biomolecules · Quantitative Biology 2023-10-02 Adnan Mahmud , Oghenejokpeme Orhobor , Ross D. King

Many biological networks have been labelled scale-free as their degree distribution can be approximately described by a powerlaw distribution. While the degree distribution does not summarize all aspects of a network it has often been…

Molecular Networks · Quantitative Biology 2007-05-23 M. P. H. Stumpf , P. J. Ingram , I. Nouvel , C. Wiuf

The decision tree recursively partitions the input space into regions and derives axis-aligned decision boundaries from data. Despite its simplicity and interpretability, decision trees lack parameterized representation, which makes it…

Machine Learning · Computer Science 2024-11-19 Jinxiong Zhang

Often the development of novel functional peptides is not amenable to high throughput or purely computational screening methods. Peptides must be synthesized one at a time in a process that does not generate large amounts of data. One way…

Biomolecules · Quantitative Biology 2020-12-14 Rainier Barrett , Andrew D. White

Knowledge Discovery and Data Mining (KDD) is a multidisciplinary area focusing upon methodologies for extracting useful knowledge from data and there are several useful KDD tools to extracting the knowledge. This knowledge can be used to…

Information Retrieval · Computer Science 2012-02-24 Surjeet Kumar Yadav , Brijesh Bharadwaj , Saurabh Pal

Random forests construct each tree with a different, randomised representation of the feature space. Their uniform voting cannot correct errors in regions where trees with incorrect representations probabilistically outnumber correct ones,…

Machine Learning · Computer Science 2026-05-28 Youngjoon Park

In this age of Big Data, machine learning based data mining methods are extensively used to inspect large scale data sets. Deriving applicable predictive modeling from these type of data sets is a challenging obstacle because of their high…

Machine Learning · Computer Science 2015-04-14 Ferhat Özgür Çatak

The issue of data-driven neural network model construction is one of the core problems in the domain of Artificial Intelligence. A standard approach assumes a fixed architecture with trainable weights. A conceptually more advanced…

Machine Learning · Computer Science 2025-07-03 Szymon Świderski , Agnieszka Jastrzębska

Semi-competing risks data arise when both non-terminal and terminal events are considered in a model. Such data with multiple events of interest are frequently encountered in medical research and clinical trials. In this framework, terminal…

Methodology · Statistics 2022-11-21 Fatemeh Mahmoudi , Xuewen Lu

A classical decision tree is completely based on splitting measures, which utilize the occurrence of random events in correspondence to its class labels in order to optimally segregate datasets. However, the splitting measures are based on…

Quantum Physics · Physics 2024-12-10 Diksha Sharma , Parvinder Singh , Atul Kumar

Large-scale data analysis is growing at an exponential rate as data proliferates in our societies. This abundance of data has the advantage of allowing the decision-maker to implement complex models in scenarios that were prohibitive…

Optimization and Control · Mathematics 2022-01-11 Marco Repetto , Davide La Torre , Muhammad Tariq

This thesis is dedicated to the statistical analysis of multi-sub ject fMRI data, with the purpose of identifying bain structures involved in certain cognitive or sensori-motor tasks, in a reproducible way across sub jects. To overcome…

Applications · Statistics 2010-05-19 Merlin Keller , Alexis Roche , Marc Lavielle

We propose and study a multi-scale approach to vector quantization. We develop an algorithm, dubbed reconstruction trees, inspired by decision trees. Here the objective is parsimonious reconstruction of unsupervised data, rather than…

Machine Learning · Computer Science 2019-09-05 Enrico Cecini , Ernesto De Vito , Lorenzo Rosasco

BACKGROUND: As databases grow larger, it becomes harder to fully control their collection, and they frequently come with missing values: incomplete observations. These large databases are well suited to train machine-learning models, for…

Machine Learning · Computer Science 2022-02-23 Alexandre Perez-Lebel , Gaël Varoquaux , Marine Le Morvan , Julie Josse , Jean-Baptiste Poline

Classification, which involves finding rules that partition a given data set into disjoint groups, is one class of data mining problems. Approaches proposed so far for mining classification rules for large databases are mainly decision tree…

Machine Learning · Computer Science 2017-01-09 Hongjun Lu , Rudy Setiono , Huan Liu

While large training datasets generally offer improvement in model performance, the training process becomes computationally expensive and time consuming. Distributed learning is a common strategy to reduce the overall training time by…

Machine Learning · Statistics 2021-10-22 Nicole Mücke , Enrico Reiss , Jonas Rungenhagen , Markus Klein