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For taxonomic levels higher than species, the abundance distributions of number of subtaxa per taxon tend to approximate power laws, but often show strong deviationns from such a law. Previously, these deviations were attributed to…

Biological Physics · Physics 2009-11-06 Johan Chu , Chris Adami

The synchronization of two stochastically coupled one-dimensional cellular automata (CA) is analyzed. It is shown that the transition to synchronization is characterized by a dramatic increase of the statistical complexity of the patterns…

Cellular Automata and Lattice Gases · Physics 2007-05-23 Juan R. Sánchez , Ricardo López-Ruiz

An important component in studying mathematical models in many biochemical systems, such as those found in developmental biology, is phase transition. The purpose of this work is to analyze the phase transition property of a…

Analysis of PDEs · Mathematics 2013-12-19 Masoud Yari

The cellular automaton model is used to simulate diffusion and aggregation with dissociation of point particles in 2D. A continuous phase transition is found that separates creation of compact aggregates and fractal ones. The transition is…

Computational Physics · Physics 2015-04-17 Yuriy G. Gordienko , Elena E. Zasimchuk

A modified version of Langton's ant is considered. The modified automaton is allowed to go straight $N$-th step instead of turning. The cell state, however, is changed as usually. Depending on the value of $N$ the automaton exhibits…

Cellular Automata and Lattice Gases · Physics 2018-07-25 Paweł Tokarz

Cellular automata (CA) provide a minimal formalism for investigating how simple local interactions generate rich spatiotemporal behavior in domains as diverse as traffic flow, ecology, tissue morphogenesis and crystal growth. However,…

Machine Learning · Computer Science 2025-06-24 Jaime A. Berkovich , Noah S. David , Markus J. Buehler

In this paper we study $\nu$-CA on one-dimensional lattice defined over a finite set of local rules. The main goal is to determine how the local rules can be mixed to ensure the produced $\nu$-CA has some properties. In a first part, we…

Formal Languages and Automata Theory · Computer Science 2011-08-09 Julien Provillard , Enrico Formenti , Alberto Dennunzio

A simple model of macroevolution is proposed exhibiting both the property of punctuated equilibrium and the dynamics of potentialities for different species to evolve towards increasingly higher complexity. It is based on the phenomenon of…

Biological Physics · Physics 2007-05-23 Siegfried Fussy , Gerhard Groessing , Herbert Schwabl

Neural Cellular Automata (NCAs) are bio-inspired dynamical systems in which identical cells iteratively apply a learned local update rule to self-organize into complex patterns, exhibiting regeneration, robustness, and spontaneous dynamics.…

Computer Vision and Pattern Recognition · Computer Science 2026-05-05 Ehsan Pajouheshgar , Yitao Xu , Ali Abbasi , Alexander Mordvintsev , Wenzel Jakob , Sabine Süsstrunk

A punctuated equilibrium model of biological evolution with relative fitness between different species being the fundamental driving force of evolution is introduced. Mutation is modeled as a fitness updating cellular automaton process…

Condensed Matter · Physics 2015-06-25 H. F. Chau , L. Mak , P. K. Kwok

Agent-based (AB) or Cellular Automata (CA) models are rule based and are a relatively simple discrete method that can be used to simulate complex interactions of many agents or cells. The relative ease of implementing the computational…

Dynamical Systems · Mathematics 2019-09-11 Michael A. Yereniuk , Sarah D. Olson

Both cellular automata (CA) and lattice-gas automata (LG) provide finite algorithmic presentations for certain classes of infinite dynamical systems studied by symbolic dynamics; it is customary to use the term `cellular automaton' or…

Cellular Automata and Lattice Gases · Physics 2007-09-11 Tommaso Toffoli , Silvio Capobianco , Patrizia Mentrasti

We present a stochastic CA modelling approach of corrosion based on spatially separated electrochemical half-reactions, diffusion, acido-basic neutralization in solution and passive properties of the oxide layers. Starting from different…

Neural cellular automata (Neural CA) are a recent framework used to model biological phenomena emerging from multicellular organisms. In these systems, artificial neural networks are used as update rules for cellular automata. Neural CA are…

Neural and Evolutionary Computing · Computer Science 2021-07-13 Alexandre Variengien , Stefano Nichele , Tom Glover , Sidney Pontes-Filho

A cellular automaton model is used to describe the dynamics of the catalytic oxidation of $CO$ on a $Pt(100)$ surface. The cellular automaton rules account for the structural phase transformations of the $Pt$ substrate, the reaction…

chao-dyn · Physics 2015-06-24 R. Danielak , A. Perera , M. Moreau , M. Frankowicz , R. Kapral

Generative modeling seeks to approximate the statistical properties of real data, enabling synthesis of new data that closely resembles the original distribution. Generative Adversarial Networks (GANs) and Denoising Diffusion Probabilistic…

Computer Vision and Pattern Recognition · Computer Science 2024-07-04 Marawan Elbatel , Konstantinos Kamnitsas , Xiaomeng Li

Design patterns are generalized solutions to frequently recurring problems. They were initially developed by architects and computer scientists to create a higher level of abstraction for their designs. Here, we extend these concepts to…

Molecular Networks · Quantitative Biology 2023-10-13 Steven S. Andrews , H. Steven Wiley , Herbert M. Sauro

Cellular automata are discrete and computational models thatcan be shown as general models of complexity. They are used in varied applications to derive the generalized behavior of the presented model. In this paper we have took one such…

Neural and Evolutionary Computing · Computer Science 2020-05-14 Karan Nayak

A classical local cellular automaton can describe an interacting quantum field theory for fermions. We construct a simple classical automaton for a particular version of the Thirring model with imaginary coupling. This interacting fermionic…

Quantum Physics · Physics 2021-02-03 C. Wetterich

Precipitation/dissolution reactions coupled with solute transport are modelled as a cellular automaton in which solute molecules perform a random walk on a regular lattice and react according to a local probabilistic rule. Stationary solid…

comp-gas · Physics 2009-10-28 T. Karapiperis