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The rate-limiting step of some enzymatic reactions is a physical step, i.e. diffusion. The efficiency of such reactions can be improved through an increase in the arrival rate of the substrate molecules, e.g. by a directed passage of…

Biological Physics · Physics 2007-05-23 Mehrdad Ghaemi , Nasrollah Rezaei-Ghaleh , Mohammad-Nabi Sarbolouki

A simple mechanism for the emergence of complexity in cellular automata out of predictable dynamics is described. This leads to unfold the concept of conditional predictability for systems whose trajectory can only be piecewise known. The…

Cellular Automata and Lattice Gases · Physics 2015-06-17 Vladimir Garcia-Morales

In this paper, we formalize precisely the sense in which the application of cellular automaton to partial configuration is a natural extension of its local transition function through the categorical notion of Kan extension. In fact, the…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-03-05 Alexandre Fernandez , Luidnel Maignan , Antoine Spicher

The objective is the design of a Cellular Automata rule that can form patterns with 'touching' loops. A loop is defined as a closed path of 1-cells in a 2D grid on a zero background and with a zero border. A path cell is connected with two…

Cellular Automata and Lattice Gases · Physics 2024-10-18 Rolf Hoffmann

One technique for creating semiconductor crystals with new, desired properties involves replacing some atoms in the crystal lattice with additives - atoms of a different type. This substitution not only alters the bulk properties of the…

Materials Science · Physics 2025-06-12 M. A. Chabowska , M. A. Załuska-Kotur

The original Hardenberg's model of biomass patterns in arid and semi-arid regions is revisited to extend it to more general non flat regions. It is proposed a technique to study these more generalized (non-flat) regions using both a…

Populations and Evolution · Quantitative Biology 2019-03-19 Rubén Martínez D , Andrea Montiel P. , J. F. Rojas

We present a simple model for describing the dynamics of the interaction between a homogeneous population or society, and the natural resources and reserves that the society needs for its survival. The model is formulated in terms of…

Physics and Society · Physics 2020-04-22 Basil Grammaticos , Ralph Willox , Junkichi Satsuma

The cellular automata (CA) approach to traffic modeling is extended to allow for spatially homogeneous steady state solutions that cover a two dimensional region in the flow-density plane. Hence these models fulfill a basic postulate of a…

Statistical Mechanics · Physics 2009-11-07 Boris S. Kerner , Sergey L. Klenov , Dietrich E. Wolf

Cellular automata (CAs) are fully-discrete dynamical models that have received much attention due to the fact that their relatively simple setup can nonetheless express highly complex phenomena. Despite the model's theoretical maturity and…

Cellular Automata and Lattice Gases · Physics 2025-07-10 Michiel Rollier , Kallil M. C. Zielinski , Aisling J. Daly , Odemir M. Bruno , Jan M. Baetens

Can we quantify the change of complexity throughout evolutionary processes? We attempt to address this question through an empirical approach. In very general terms, we simulate two simple organisms on a computer that compete over limited…

Neural and Evolutionary Computing · Computer Science 2016-01-05 Alyssa Adams , Hector Zenil , Eduardo Hermo Reyes , Joost Joosten

Modeling the ability of multicellular organisms to build and maintain their bodies through local interactions between individual cells (morphogenesis) is a long-standing challenge of developmental biology. Recently, the Neural Cellular…

Neural and Evolutionary Computing · Computer Science 2022-06-02 Alexander Mordvintsev , Ettore Randazzo , Craig Fouts

The searching for the stable patterns in the evolution of cellular automata is implemented using stochastic synchronization between the present structures of the system and its precedent configurations. For most of the known evolution rules…

Cellular Automata and Lattice Gases · Physics 2007-05-23 J. R. Sanchez , R. Lopez-Ruiz

Self-organizing complex systems can be modeled using cellular automaton models. However, the parametrization of these models is crucial and significantly determines the resulting structural pattern. In this research, we introduce and…

Cellular Automata and Lattice Gases · Physics 2025-01-14 Alexey Kazarnikov , Nadja Ray , Heikki Haario , Joona Lappalainen , Andreas Rupp

Neural Cellular Automata (NCAs) are a model of morphogenesis, capable of growing two-dimensional artificial organisms from a single seed cell. In this paper, we show that NCAs can be trained to respond to signals. Two types of signal are…

Neural and Evolutionary Computing · Computer Science 2024-01-30 James Stovold

A family of multi-value cellular automaton (CA) associated with traffic flow is presented in this paper. The family is obtained by extending the rule-184 CA, which is an ultradiscrete analogue to the Burgers equation. CA models in the…

Adaptation and Self-Organizing Systems · Physics 2007-05-23 Katsuhiro Nishinari , Daisuke Takahashi

Young's cellular automaton, recently applied to study the spatiotemporal evolution of binary patterns for favorable/hostile environments, has now been modified from a different point of view. In this model, each differentiated cell (DC)…

Statistical Mechanics · Physics 2024-10-15 R. Piasecki , W. Olchawa , D. Fraczek

Spontaneous self-replication in cellular automata has long been considered rare, with most known examples requiring careful design or artificial initialization. In this paper, we present formal, causal evidence that such replication can…

Cellular Automata and Lattice Gases · Physics 2025-08-12 Arend Hintze , Clifford Bohm

Artificial organisms are computer programs that self-replicate, mutate, compete and evolve. How do these lifelike information-processing behaviours could arise in diverse far-from-equilibrium physical systems remains an open question. Here,…

Quantum Physics · Physics 2021-08-13 Daniel Valente

Simple elastic models of spin-crossover compounds are known empirically to exhibit classical critical behavior. We demonstrate how the long-ranged interactions responsible for this behavior arise naturally upon integrating out mechanical…

Statistical Mechanics · Physics 2020-07-15 Layne B. Frechette , Christoph Dellago , Phillip L. Geissler

This paper presents a classification of Cellular Automata rules based on its properties at the nth iteration. Elaborate computer program has been designed to get the nth iteration for arbitrary 1-D or 2-D CA rules. Studies indicate that the…

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