Related papers: Representation of ordered trees with a given degre…
Variable trees are a new method for the exploration of discrete multivariate data. They display nested subsets and corresponding frequencies and percentages. Manual calculation of these quantities can be laborious, especially when there are…
We observe that a standard transformation between \emph{ordinal} trees (arbitrary rooted trees with ordered children) and binary trees leads to interesting succinct binary tree representations. There are four symmetric versions of these…
Phylogenetic (evolutionary) trees and networks are leaf-labeled graphs that are widely used to represent the evolutionary relationships between entities such as species, languages, cancer cells, and viruses. To reconstruct and analyze…
We study the degree landscape of the partition graph $G_n$, whose vertices are the integer partitions of $n$ and whose edges correspond to elementary transfers of one unit between parts, followed by reordering. Using the previously…
Recently proposed budding tree is a decision tree algorithm in which every node is part internal node and part leaf. This allows representing every decision tree in a continuous parameter space, and therefore a budding tree can be jointly…
In this article, we give a precise mathematical meaning to `linear? time' that matches experimental behaviour of the algorithm. The sorting algorithm is not our own, it is a variant of radix sort with counting sort as a subroutine. The true…
A string-like compact data structure for unlabelled rooted trees is given using 2n bits.
Broadcasting and convergecasting are pivotal services in distributed systems, in particular, in wireless ad-hoc and sensor networks, which are characterized by time- varying communication graphs. We study the question of whether it is…
We study the structure of trees minimizing their number of stable sets for given order $n$ and stability number $\alpha$. Our main result is that the edges of a non-trivial extremal tree can be partitioned into $n-\alpha$ stars, each of…
Let $A$ be a static array storing $n$ elements from a totally ordered set. We present a data structure of optimal size at most $n\log_2(3+2\sqrt{2})+o(n)$ bits that allows us to answer the following queries on $A$ in constant time, without…
An order-theoretic forest is a countable partial order such that the set of elements larger than any element is linearly ordered. It is an order-theoretic tree if any two elements have an upper-bound. The order type of a branch can be any…
The \emph{Steiner tree} problem is one of the fundamental and classical problems in combinatorial optimization. In this paper, we study this problem in the $\mathcal{CONGESTED}$ $\mathcal{CLIQUE}$ model of distributed computing and present…
A chief problem in phylogenetics and database theory is the computation of a maximum consistent tree from a set of rooted or unrooted trees. A standard input are triplets, rooted binary trees on three leaves, or quartets, unrooted binary…
This report details the generation and use of tree node ordering keys in a single relational database table. The keys for each node are calculated from the keys of its parent, in such a way that the sort order places every node in the tree…
Consider the computations at a node in a message passing algorithm. Assume that the node has incoming and outgoing messages $\mathbf{x} = (x_1, x_2, \ldots, x_n)$ and $\mathbf{y} = (y_1, y_2, \ldots, y_n)$, respectively. In this paper, we…
The quartet distance is a measure of similarity used to compare two unrooted phylogenetic trees on the same set of $n$ leaves, defined as the number of subsets of four leaves related by a different topology in both trees. After a series of…
Fischer has shown how to compute a minimum weight spanning tree of degree at most $b \Delta^* + \lceil \log\_b n\rceil$ in time $O(n^{4 + 1/\ln b})$ for any constant $b > 1$, where $\Delta^*$ is the value of an optimal solution and $n$ is…
Over some types of trees with a given number of vertices, which trees minimize or maximize the total number of subtrees or leaf containing subtrees are studied. Here are some of the main results:\ (1)\, Sharp upper bound on the total number…
For a positive integer $k$ and an ordered set of $n$ points in the plane, define its k-sector ordered Yao graphs as follows. Divide the plane around each point into $k$ equal sectors and draw an edge from each point to its closest…
In 2001, Koml\'os, S\'ark\"ozy and Szemer\'edi proved that, for each $\alpha>0$, there is some $c>0$ and $n_0$ such that, if $n\geq n_0$, then every $n$-vertex graph with minimum degree at least $(1/2+\alpha)n$ contains a copy of every…