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Beta-turn prediction is useful in protein function studies and experimental design. Although recent approaches using machine-learning techniques such as SVM, neural networks, and K-NN have achieved good results for beta-turn pre-diction,…

Biomolecules · Quantitative Biology 2018-08-14 Chao Fang , Yi Shang , Dong Xu

Initial weighting is significant in deep neural networks because the random selection of weights produces different outputs and increases the probability of overfitting and underfitting. On the other hand, vector-based approaches to extract…

Image and Video Processing · Electrical Eng. & Systems 2024-02-07 Elham Sadeghnezhad , Sajjad Salem

Capsule networks are a type of neural network that identify image parts and form the instantiation parameters of a whole hierarchically. The goal behind the network is to perform an inverse computer graphics task, and the network parameters…

Computer Vision and Pattern Recognition · Computer Science 2024-04-25 Saeid Abbassi , Kamaledin Ghiasi-Shirazi , Ahad Harati

In this paper, we formalize the idea behind capsule nets of using a capsule vector rather than a neuron activation to predict the label of samples. To this end, we propose to learn a group of capsule subspaces onto which an input feature…

Computer Vision and Pattern Recognition · Computer Science 2018-10-23 Liheng Zhang , Marzieh Edraki , Guo-Jun Qi

In recent years, convolutional neural networks (CNN) have played an important role in the field of deep learning. Variants of CNN's have proven to be very successful in classification tasks across different domains. However, there are two…

Machine Learning · Statistics 2017-12-12 Edgar Xi , Selina Bing , Yang Jin

Capsule networks were proposed as an alternative approach to Convolutional Neural Networks (CNNs) for learning object-centric representations, which can be leveraged for improved generalization and sample complexity. Unlike CNNs, capsule…

Computer Vision and Pattern Recognition · Computer Science 2022-06-07 Fabio De Sousa Ribeiro , Kevin Duarte , Miles Everett , Georgios Leontidis , Mubarak Shah

MOTIVATION: Proteins fold into complex structures that are crucial for their biological functions. Experimental determination of protein structures is costly and therefore limited to a small fraction of all known proteins. Hence, different…

Biomolecules · Quantitative Biology 2018-04-18 David Menéndez Hurtado , Karolis Uziela , Arne Elofsson

Many text classification applications require models with satisfying performance as well as good interpretability. Traditional machine learning methods are easy to interpret but have low accuracies. The development of deep learning models…

Computation and Language · Computer Science 2020-06-02 Zhengyang Wang , Xia Hu , Shuiwang Ji

Glaucoma is an irreversible ocular disease and is the second leading cause of visual disability worldwide. Slow vision loss and the asymptomatic nature of the disease make its diagnosis challenging. Early detection is crucial for preventing…

Computer Vision and Pattern Recognition · Computer Science 2023-12-05 Gyanendar Manohar , Ruairi O'Reilly

Deep convolutional neural networks, assisted by architectural design strategies, make extensive use of data augmentation techniques and layers with a high number of feature maps to embed object transformations. That is highly inefficient…

Computer Vision and Pattern Recognition · Computer Science 2021-12-21 Vittorio Mazzia , Francesco Salvetti , Marcello Chiaberge

Invariance has recently proven to be a powerful inductive bias in machine learning models. One such class of predictive or generative models are tensor networks. We introduce a new numerical algorithm to construct a basis of tensors that…

Machine Learning · Computer Science 2024-07-02 Brent Sprangers , Nick Vannieuwenhoven

Understanding morphological types of galaxies is a key parameter for studying their formation and evolution. Neural networks that have been used previously for galaxy morphology classification have some disadvantages, such as not being…

Instrumentation and Methods for Astrophysics · Physics 2019-04-10 Reza Katebi , Yadi Zhou , Ryan Chornock , Razvan Bunescu

In this paper we introduce a new inductive bias for capsule networks and call networks that use this prior $\gamma$-capsule networks. Our inductive bias that is inspired by TE neurons of the inferior temporal cortex increases the…

Machine Learning · Computer Science 2019-12-06 David Peer , Sebastian Stabinger , Antonio Rodriguez-Sanchez

Binding energy is a fundamental thermodynamic property that governs molecular interactions, playing a crucial role in fields such as healthcare and the natural sciences. It is particularly relevant in drug development, vaccine design, and…

Quantum Physics · Physics 2025-08-06 Erico Souza Teixeira , Lucas Barros Fernandes , Yara Rodrigues Inácio

Capsule networks are a neural network architecture specialized for visual scene recognition. Features and pose information are extracted from a scene and then dynamically routed through a hierarchy of vector-valued nodes called 'capsules'…

Neurons and Cognition · Quantitative Biology 2022-10-07 Alex B. Kiefer , Beren Millidge , Alexander Tschantz , Christopher L. Buckley

Deep neural networks are increasingly being used for the analysis of medical images. However, most works neglect the uncertainty in the model's prediction. We propose an uncertainty-aware deep kernel learning model which permits the…

Machine Learning · Computer Science 2021-06-11 Zhiliang Wu , Yinchong Yang , Jindong Gu , Volker Tresp

The computational prediction of a protein structure from its sequence generally relies on a method to assess the quality of protein models. Most assessment methods rank candidate models using heavily engineered structural features, defined…

Biomolecules · Quantitative Biology 2018-11-26 Georgy Derevyanko , Sergei Grudinin , Yoshua Bengio , Guillaume Lamoureux

In this paper, we develop and explore deep anomaly detection techniques based on the capsule network (CapsNet) for image data. Being able to encoding intrinsic spatial relationship between parts and a whole, CapsNet has been applied as both…

Machine Learning · Computer Science 2019-07-16 Xiaoyan Li , Iluju Kiringa , Tet Yeap , Xiaodan Zhu , Yifeng Li

This project considers Capsule Networks, a recently introduced machine learning model that has shown promising results regarding generalization and preservation of spatial information with few parameters. The Capsule Network's inner routing…

Machine Learning · Computer Science 2020-01-10 Gonçalo Faria

Convolutional neural networks are the most widely used deep learning algorithms for traffic signal classification till date but they fail to capture pose, view, orientation of the images because of the intrinsic inability of max pooling…

Computer Vision and Pattern Recognition · Computer Science 2018-05-14 Amara Dinesh Kumar
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