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For decades, computing the LZ factorization (or LZ77 parsing) of a string has been a requisite and computationally intensive step in many diverse applications, including text indexing and data compression. Many algorithms for LZ77 parsing…

Data Structures and Algorithms · Computer Science 2020-12-11 Juha Kärkkäinen , Dominik Kempa , Simon J. Puglisi

Transformer-based Large Language Models (LLMs) often impose limitations on the length of the text input to ensure the generation of fluent and relevant responses. This constraint restricts their applicability in scenarios involving long…

Computation and Language · Computer Science 2023-12-18 Weizhi Fei , Xueyan Niu , Pingyi Zhou , Lu Hou , Bo Bai , Lei Deng , Wei Han

Prompt compression methods enhance the efficiency of Large Language Models (LLMs) and minimize the cost by reducing the length of input context. The goal of prompt compression is to shorten the LLM prompt while maintaining a high generation…

Computation and Language · Computer Science 2025-08-25 Tinghui Zhang , Yifan Wang , Daisy Zhe Wang

In the classic longest common substring (LCS) problem, we are given two strings $S$ and $T$, each of length at most $n$, over an alphabet of size $\sigma$, and we are asked to find a longest string occurring as a fragment of both $S$ and…

Data Structures and Algorithms · Computer Science 2025-11-18 Panagiotis Charalampopoulos , Tomasz Kociumaka , Jakub Radoszewski , Solon P. Pissis

We consider the problem of {\em restructuring} compressed texts without explicit decompression. We present algorithms which allow conversions from compressed representations of a string $T$ produced by any grammar-based compression…

Data Structures and Algorithms · Computer Science 2011-07-15 Keisuke Goto , Shirou Maruyama , Shunsuke Inenaga , Hideo Bannai , Hiroshi Sakamoto , Masayuki Takeda

Given a string $T$ of length $N$, the goal of grammar compression is to construct a small context-free grammar generating only $T$. Among existing grammar compression methods, RePair (recursive paring) [Larsson and Moffat, 1999] is notable…

Data Structures and Algorithms · Computer Science 2018-11-06 Kensuke Sakai , Tatsuya Ohno , Keisuke Goto , Yoshimasa Takabatake , Tomohiro I , Hiroshi Sakamoto

Given a string $S$ of length $n$, the classic string indexing problem is to preprocess $S$ into a compact data structure that supports efficient subsequent pattern queries. In this paper we consider the basic variant where the pattern is…

Data Structures and Algorithms · Computer Science 2024-02-15 Philip Bille , Inge Li Gørtz , Teresa Anna Steiner

The most fundamental problem considered in algorithms for text processing is pattern matching: given a pattern $p$ of length $m$ and a text $t$ of length $n$, does $p$ occur in $t$? Multiple versions of this basic question have been…

Data Structures and Algorithms · Computer Science 2021-11-10 Moses Ganardi , Paweł Gawrychowski

The $r$-index (Gagie et al., JACM 2020) represented a breakthrough in compressed indexing of repetitive text collections, outperforming its alternatives by orders of magnitude. Its space usage, $\mathcal{O}(r)$ where $r$ is the number of…

Data Structures and Algorithms · Computer Science 2021-03-30 Dustin Cobas , Travis Gagie , Gonzalo Navarro

One of the most famous and investigated lossless data-compression scheme is the one introduced by Lempel and Ziv about 40 years ago. This compression scheme is known as "dictionary-based compression" and consists of squeezing an input…

Data Structures and Algorithms · Computer Science 2008-02-07 Paolo Ferragina , Igor Nitto , Rossano Venturini

The longest square subsequence (LSS) problem consists of computing a longest subsequence of a given string $S$ that is a square, i.e., a longest subsequence of form $XX$ appearing in $S$. It is known that an LSS of a string $S$ of length…

Data Structures and Algorithms · Computer Science 2020-07-30 Takafumi Inoue , Shunsuke Inenaga , Hideo Bannai

Large language models have drastically changed the prospects of AI by introducing technologies for more complex natural language processing. However, current methodologies to train such LLMs require extensive resources including but not…

Computation and Language · Computer Science 2026-04-27 Noel Elias , Homa Esfahanizadeh , Kaan Kale , Sriram Vishwanath , Muriel Medard

Indexing highly repetitive strings (i.e., strings with many repetitions) for fast queries has become a central research topic in string processing, because it has a wide variety of applications in bioinformatics and natural language…

Data Structures and Algorithms · Computer Science 2021-04-19 Takaaki Nishimoto , Yasuo Tabei

Re-Pair is a grammar compression scheme with favorably good compression rates. The computation of Re-Pair comes with the cost of maintaining large frequency tables, which makes it hard to compute Re-Pair on large scale data sets. As a…

Data Structures and Algorithms · Computer Science 2019-11-19 Dominik Köppl , Tomohiro I , Isamu Furuya , Yoshimasa Takabatake , Kensuke Sakai , Keisuke Goto

Palindromes are important objects in strings which have been extensively studied from combinatorial, algorithmic, and bioinformatics points of views. It is known that the length of the longest palindromic substrings (LPSs) of a given string…

Data Structures and Algorithms · Computer Science 2021-01-11 Mitsuru Funakoshi , Yuto Nakashima , Shunsuke Inenaga , Hideo Bannai , Masayuki Takeda

The \emph{longest common extension} (\emph{LCE}) problem is to preprocess a given string $w$ of length $n$ so that the length of the longest common prefix between suffixes of $w$ that start at any two given positions is answered quickly. In…

Data Structures and Algorithms · Computer Science 2017-02-27 Yuka Tanimura , Takaaki Nishimoto , Hideo Bannai , Shunsuke Inenaga , Masayuki Takeda

A Longest Common Extension (LCE) query on a text $T$ of length $N$ asks for the length of the longest common prefix of suffixes starting at given two positions. We show that the signature encoding $\mathcal{G}$ of size $w = O(\min(z \log N…

Data Structures and Algorithms · Computer Science 2016-06-28 Takaaki Nishimoto , Tomohiro I , Shunsuke Inenaga , Hideo Bannai , Masayuki Takeda

Grammar compression is, next to Lempel-Ziv (LZ77) and run-length Burrows-Wheeler transform (RLBWT), one of the most flexible approaches to representing and processing highly compressible strings. The main idea is to represent a text as a…

Data Structures and Algorithms · Computer Science 2022-01-06 Dominik Kempa , Ben Langmead

Relative Lempel-Ziv (RLZ) parsing is a dictionary compression method in which a string $S$ is compressed relative to a second string $R$ (called the reference) by parsing $S$ into a sequence of substrings that occur in $R$. RLZ is…

Data Structures and Algorithms · Computer Science 2022-08-25 Philip Bille , Inge Li Gørtz , Simon J. Puglisi , Simon R. Tarnow

Shannon's entropy is a clear lower bound for statistical compression. The situation is not so well understood for dictionary-based compression. A plausible lower bound is $b$, the least number of phrases of a general bidirectional parse of…

Data Structures and Algorithms · Computer Science 2019-10-29 Gonzalo Navarro , Carlos Ochoa , Nicola Prezza