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Network embedding represents nodes in a continuous vector space and preserves structure information from the Network. Existing methods usually adopt a "one-size-fits-all" approach when concerning multi-scale structure information, such as…

Machine Learning · Computer Science 2018-03-28 Lei Sang , Min Xu , Shengsheng Qian , Xindong Wu

Graph matching, also known as network alignment, refers to finding a bijection between the vertex sets of two given graphs so as to maximally align their edges. This fundamental computational problem arises frequently in multiple fields…

Data Structures and Algorithms · Computer Science 2021-08-10 Cheng Mao , Mark Rudelson , Konstantin Tikhomirov

Hypergraphs serve as an effective model for depicting complex connections in various real-world scenarios, from social to biological networks. The development of Hypergraph Neural Networks (HGNNs) has emerged as a valuable method to manage…

Machine Learning · Computer Science 2024-06-17 Shuai Wang , David W. Zhang , Jia-Hong Huang , Stevan Rudinac , Monika Kackovic , Nachoem Wijnberg , Marcel Worring

Mining Electronic Health Records (EHRs) becomes a promising topic because of the rich information they contain. By learning from EHRs, machine learning models can be built to help human experts to make medical decisions and thus improve…

Machine Learning · Computer Science 2021-01-19 Zheng Liu , Xiaohan Li , Hao Peng , Lifang He , Philip S. Yu

Link prediction is a key problem for network-structured data, attracting considerable research efforts owing to its diverse applications. The current link prediction methods focus on general networks and are overly dependent on either the…

Social and Information Networks · Computer Science 2024-01-17 Min Zhou , Bisheng Li , Menglin Yang , Lujia Pan

Graph neural networks (GNNs) have shown promise in integrating protein-protein interaction (PPI) networks for identifying cancer genes in recent studies. However, due to the insufficient modeling of the biological information in PPI…

Computational Engineering, Finance, and Science · Computer Science 2025-06-24 Yilong Zang , Lingfei Ren , Yue Li , Zhikang Wang , David Antony Selby , Zheng Wang , Sebastian Josef Vollmer , Hongzhi Yin , Jiangning Song , Junhang Wu

With the rapid development of the World Wide Web (WWW), heterogeneous graphs (HG) have explosive growth. Recently, heterogeneous graph neural network (HGNN) has shown great potential in learning on HG. Current studies of HGNN mainly focus…

Social and Information Networks · Computer Science 2023-02-27 Jiayan Guo , Lun Du , Wendong Bi , Qiang Fu , Xiaojun Ma , Xu Chen , Shi Han , Dongmei Zhang , Yan Zhang

Prediction of node and graph labels are prominent network science tasks. Data analyzed in these tasks are sometimes related: entities represented by nodes in a higher-level (higher-scale) network can themselves be modeled as networks at a…

Molecular Networks · Quantitative Biology 2021-05-27 Shawn Gu , Meng Jiang , Pietro Hiram Guzzi , Tijana Milenkovic

In this paper, we focus on graph representation learning of heterogeneous information network (HIN), in which various types of vertices are connected by various types of relations. Most of the existing methods conducted on HIN revise…

Machine Learning · Computer Science 2019-12-24 Huiting Hong , Hantao Guo , Yucheng Lin , Xiaoqing Yang , Zang Li , Jieping Ye

Using tiny, equal-sized tasks (Homogeneous microTasking, HomT) has long been regarded an effective way of load balancing in parallel computing systems. When combined with nodes pulling in work upon becoming idle, HomT has the desirable…

Performance · Computer Science 2018-10-03 Yuquan Shan , George Kesidis , Bhuvan Urgaonkar , Jorg Schad , Jalal Khamse-Ashari , Ioannis Lambadaris

Hybrid parallelism techniques are essential for efficiently training large language models (LLMs). Nevertheless, current automatic parallel planning frameworks often overlook the simultaneous consideration of node heterogeneity and dynamic…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-06-04 Ruilong Wu , Xinjiao Li , Yisu Wang , Xinyu Chen , Dirk Kutscher

Aligning protein interaction networks (PPI) of two or more organisms consists of finding a mapping of the nodes (proteins) of the networks that captures important structural and functional associations (similarity). It is a well studied but…

Molecular Networks · Quantitative Biology 2020-10-12 Concettina Guerra , Pietro Hiram Guzzi

Heterogeneous graphs are ubiquitous in real-world applications because they can represent various relationships between different types of entities. Therefore, learning embeddings in such graphs is a critical problem in graph machine…

Machine Learning · Computer Science 2024-04-02 Yue Zhang , Yuntian He , Saket Gurukar , Srinivasan Parthasarathy

Multi-omics data offer unprecedented insights into complex biological systems, yet their high dimensionality, sparsity, and intricate interactions pose significant analytical challenges. Network-based approaches have advanced multi-omics…

This paper addresses the problem of parallelizing computations to study non-linear dynamics in large networks of non-locally coupled oscillators using heterogeneous computing resources. The proposed approach can be applied to a variety of…

Chaotic Dynamics · Physics 2025-07-04 Oleksandr Sudakov , Volodymyr Maistrenko

Medical images are often acquired in different settings, requiring harmonization to adapt to the operating point of algorithms. Specifically, to standardize the physical spacing of imaging voxels in heterogeneous inference settings, images…

Image and Video Processing · Electrical Eng. & Systems 2024-07-08 Samuel Joutard , Maximilian Pietsch , Raphael Prevost

Inspired by the human brain's structure and function, Artificial Neural Networks (ANN) were developed for data classification. However, existing Neural Networks, including Deep Neural Networks, do not mimic the brain's rich structure. They…

Machine Learning · Computer Science 2024-11-01 Remya Ajai A S , Nithin Nagaraj

With the explosive growth of new graduates with research degrees every year, unprecedented challenges arise for early-career researchers to find a job at a suitable institution. This study aims to understand the behavior of academic job…

Social and Information Networks · Computer Science 2022-02-17 Xiangtai Chen , Tao Tang , Jing Ren , Ivan Lee , Honglong Chen , Feng Xia

In this paper, we develop a graphical modeling framework for the inference of networks across multiple sample groups and data types. In medical studies, this setting arises whenever a set of subjects, which may be heterogeneous due to…

In future networks, an operator may employ a wide range of access points using diverse radio access technologies (RATs) over multiple licensed and unlicensed frequency bands. This paper studies centralized user association and spectrum…

Networking and Internet Architecture · Computer Science 2016-09-01 Zhiyi Zhou , Dongning Guo , Michael L. Honig