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We consider the problem of learning a non-deterministic probabilistic system consistent with a given finite set of positive and negative tree samples. Consistency is defined with respect to strong simulation conformance. We propose learning…

Logic in Computer Science · Computer Science 2012-07-24 Anvesh Komuravelli , Corina S. Pasareanu , Edmund M. Clarke

This thesis focuses on the applications of mathematical tools and concepts brought from nonequilibrium statistical physics to the modeling of ecological problems. The first part provides a short introduction where the theoretical concepts…

Populations and Evolution · Quantitative Biology 2017-01-12 Ricardo Martinez-Garcia

Standard supervised learning procedures are validated against a test set that is assumed to have come from the same distribution as the training data. However, in many problems, the test data may have come from a different distribution. We…

Machine Learning · Statistics 2019-08-28 Tim Coleman , Kimberly Kaufeld , Mary Frances Dorn , Lucas Mentch

We present a model for evolution and extinction in large ecosystems. The model incorporates the effects of interactions between species and the influences of abiotic environmental factors. We study the properties of the model by approximate…

adap-org · Physics 2008-02-03 Bruce W. Roberts , M. E. J. Newman

The one-dimensional forest-fire model including lightnings is studied numerically and analytically. For the tree correlation function, a new correlation length with critical exponent \nu ~ 5/6 is found by simulations. A Hamiltonian…

Condensed Matter · Physics 2015-02-24 A. Honecker , I. Peschel

We define a notion of stochastic domination between trees, where one tree dominates another if when the vertices of each are labeled with independent, identically distributed random variables, one tree is always more likely to contain a…

Probability · Mathematics 2007-05-23 Robin Pemantle , Yuval Peres

Localised patterns are often observed in models for dryland vegetation, both as peaks of vegetation in a desert state and as gaps within a vegetated state, known as `fairy circles'. Recent results from radial spatial dynamics show that…

Dynamical Systems · Mathematics 2024-10-14 Dan J. Hill

The increasing complexity of data requires methods and models that can effectively handle intricate structures, as simplifying them would result in loss of information. While several analytical tools have been developed to work with complex…

Methodology · Statistics 2023-06-16 Riccardo Giubilei , Tullia Padellini , Pierpaolo Brutti

In this article a stochastic cellular automata model is examined, which has been developed to study a "small" world, where local changes may noticeably alter global characteristics. This is applied to a climate model, where global…

Cellular Automata and Lattice Gases · Physics 2011-03-24 Lichtenegger Klaus , Schappacher Wilhelm

Regular vegetation patterns in semiarid ecosystems are believed to arise from the interplay between long-range competition and facilitation processes acting at smaller distances. We show that, under rather general conditions, long-range…

Populations and Evolution · Quantitative Biology 2014-07-24 Ricardo Martinez-Garcia , Justin M. Calabrese , Emilio Hernandez-Garcia , Cristobal Lopez

A covariance graph is an undirected graph associated with a multivariate probability distribution of a given random vector where each vertex represents each of the different components of the random vector and where the absence of an edge…

Probability · Mathematics 2009-12-15 Dhafer Malouche , Bala Rajaratnam

Mast fruiting represents a synchronous population behaviour which can spread on large landscape areas. This reproductive pattern is generally perceived as a synchronous periodic production of large seed crops and has a significant practical…

Quantitative Methods · Quantitative Biology 2016-02-12 Ciprian Palaghianu , Marian Dragoi

In the context of global warming, tree populations rely on two primary mechanisms of adaptation: phenotypic plasticity, which enables individuals to adjust their behavior in response to environmental stress, and genetic evolution, driven by…

Populations and Evolution · Quantitative Biology 2026-01-27 Sirine Boucenna , Vasilis Dakos , Gaël Raoul

What determines biodiversity in nature is a prominent issue in ecology, especially in biotic resource systems that are typically devoid of cross-feeding. Here, we show that by incorporating pairwise encounters among consumer individuals…

Populations and Evolution · Quantitative Biology 2025-06-18 Ju Kang , Shijie Zhang , Yiyuan Niu , Xin Wang

Understanding the dynamics of wildfire is crucial for developing management and intervention strategies. Mathematical and computational models can be used to improve our understanding of wildfire processes and dynamics. This paper presents…

Dynamical Systems · Mathematics 2024-02-02 Cordula Reisch , Adrián Navas-Montilla , Ilhan Özgen-Xian

We propose a model of multispecies populations surviving on distributed resources. System dynamics are investigated under changes in abiotic factors such as the climate, as parameterized through environmental temperature. In particular, we…

Populations and Evolution · Quantitative Biology 2017-10-25 I. Sudakov , S. A. Vakulenko , D. Kirievskaya , K. M. Golden

Over the last few decades, ecologists have come to appreciate that key ecological patterns, which describe ecological communities at relatively large spatial scales, are not only scale dependent, but also intimately intertwined. The…

Populations and Evolution · Quantitative Biology 2016-09-13 Fabio Peruzzo , Sandro Azaele

In 2023, Sicily faced an escalating issue of uncontrolled fires, necessitating a thorough investigation into their spatio-temporal dynamics. Our study addresses this concern through point process theory. Each wildfire is treated as a unique…

Applications · Statistics 2024-02-19 Nicoletta D'Angelo , Alessandro Albano , Andrea Gilardi , Giada Adelfio

The extinction of species is a core process that affects the diversity of life on Earth. One way of investigating the causes and consequences of extinctions is to build conceptual ecological models, and to use the dynamical outcomes of such…

Populations and Evolution · Quantitative Biology 2017-11-28 Sergey A. Vakulenko , Ivan Sudakov , Luke Mander

Extremal graphical models are sparse statistical models for multivariate extreme events. The underlying graph encodes conditional independencies and enables a visual interpretation of the complex extremal dependence structure. For the…

Methodology · Statistics 2022-08-18 Sebastian Engelke , Stanislav Volgushev
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