Related papers: From unicellular fatgraphs to trees
Treewidth is a parameter that emerged from the study of minor closed classes of graphs (i.e. classes closed under vertex and edge deletion, and edge contraction). It in some sense describes the global structure of a graph. Roughly, a graph…
We investigate the graphs formed from the vertices and creases of an origami pattern that can be folded flat along all of its creases. As we show, this is possible for a tree if and only if the internal vertices of the tree all have even…
The network reconfiguration problem seeks to find a rooted tree $T$ such that the energy of the (unique) feasible electrical flow over $T$ is minimized. The tree requirement on the support of the flow is motivated by operational constraints…
Phylogenetic trees are leaf-labelled trees used to model the evolution of species. In practice it is not uncommon to obtain two topologically distinct trees for the same set of species, and this motivates the use of distance measures to…
We define a special case of tree decompositions for planar graphs that respect a given embedding of the graph. We study the analogous width of the resulting decomposition we call the embedded-width of a plane graph. We show both upper…
In this article, we look into the tree gonality of genus $3$ metric graphs $\Gamma$ which is defined as the minimum of degrees of all tropical morphisms from any tropical modification of $\Gamma$ to any metric tree. It is denoted by…
A flip in a plane spanning tree $T$ is the operation of removing one edge from $T$ and adding another edge such that the resulting structure is again a plane spanning tree. For trees on a set of points in convex position we study two…
Interest in inverse dynamical, spectral and scattering problems for differential equations on graphs is motivated by possible applications to nano-electronics and quantum waveguides and by a variety of other classical and quantum…
We introduce the inverse Voronoi diagram problem in graphs: given a graph $G$ with positive edge-lengths and a collection $\mathbb{U}$ of subsets of vertices of $V(G)$, decide whether $\mathbb{U}$ is a Voronoi diagram in $G$ with respect to…
Just how many different connected shapes result from slicing a cube along some of its edges and unfolding it into the plane? In this article we answer this question by viewing the cube both as a surface and as a graph of vertices and edges.…
We present a constraint model for the problem of producing a tree decomposition of a graph. The inputs to the model are a simple graph G, the number of nodes in the desired tree decomposition and the maximum cardinality of each node in that…
The $(n-\ell)$-deck of an $n$-vertex graph is the multiset of (unlabeled) subgraphs obtained from it by deleting $\ell$ vertices. An $n$-vertex graph is $\ell$-reconstructible if it is determined by its $(n-\ell)$-deck, meaning that no…
We study the evolution of graphs densifying by adding edges: Two vertices are chosen randomly, and an edge is (i) established if each vertex belongs to a tree; (ii) established with probability $p$ if only one vertex belongs to a tree;…
Given a graph $G$ and two spanning trees $T$ and $T'$ in $G$, Spanning Tree Reconfiguration asks whether there is a step-by-step transformation from $T$ to $T'$ such that all intermediates are also spanning trees of $G$, by exchanging an…
An amino acid sequence of a protein may be decomposed into consecutive overlapping strings of length K. How unique is the converse, i.e., reconstruction of amino acid sequences using the set of K-strings obtained in the decomposition? This…
Tanglegrams are special graphs that consist of a pair of rooted binary trees with the same number of leaves, and a perfect matching between the two leaf-sets. These objects are of use in phylogenetics and are represented with straightline…
In this paper we construct spanning trees in hyperbolic graphs that represent their hyperbolic compactification in a good way: so that the tree has a bounded number of distinct rays to each boundary point. The bound depends only on the…
We introduce a variational algorithm to simulate quantum many-body states based on a tree tensor network ansatz which releases the isometry constraint usually imposed by the real-space renormalization coarse-graining: This additional…
In this paper we consider a random partition of the plane into cells, the partition being based on the nodes and links of a {\it random planar geometric graph}. The resulting structure generalises the \emph{random \tes}\ hitherto studied in…
We investigate the complexity of finding a transformation from a given spanning tree in a graph to another given spanning tree in the same graph via a sequence of edge flips. The exchange property of the matroid bases immediately yields…