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Suffix trees and suffix arrays are two of the most widely used data structures for text indexing. Each uses linear space and can be constructed in linear time for polynomially sized alphabets. However, when it comes to answering queries…

Data Structures and Algorithms · Computer Science 2013-11-08 Richard Cole , Tsvi Kopelowitz , Moshe Lewenstein

Consider the computations at a node in a message passing algorithm. Assume that the node has incoming and outgoing messages $\mathbf{x} = (x_1, x_2, \ldots, x_n)$ and $\mathbf{y} = (y_1, y_2, \ldots, y_n)$, respectively. In this paper, we…

Information Theory · Computer Science 2021-10-12 Xuan He , Kui Cai , Liang Zhou

We show how to construct a dynamic ordered dictionary, supporting insert/delete/rank/select on a set of $n$ elements from a universe of size $U$, that achieves the optimal amortized expected time complexity of $O(1 + \log n / \log \log U)$,…

Data Structures and Algorithms · Computer Science 2025-10-23 William Kuszmaul , Jingxun Liang , Renfei Zhou

In binary jumbled pattern matching we wish to preprocess a binary string $S$ in order to answer queries $(i,j)$ which ask for a substring of $S$ that is of size $i$ and has exactly $j$ 1-bits. The problem naturally generalizes to…

Data Structures and Algorithms · Computer Science 2014-07-01 Danny Hermelin , Gad M. Landau , Yuri Rabinovich , Oren Weimann

Assume that an $N$-bit sequence $S$ of $k$ numbers encoded as Elias gamma codes is given as input. We present space-efficient algorithms for sorting, dense ranking and competitive ranking on $S$ in the word RAM model with word size…

Data Structures and Algorithms · Computer Science 2024-09-04 Frank Kammer , Johannes Meintrup , Andrej Sajenko

We describe a data structure, called a priority range tree, which accommodates fast orthogonal range reporting queries on prioritized points. Let $S$ be a set of $n$ points in the plane, where each point $p$ in $S$ is assigned a weight…

Computational Geometry · Computer Science 2010-09-21 Michael T. Goodrich , Darren Strash

We define simple variants of zip trees, called zip-zip trees, which provide several advantages over zip trees, including overcoming a bias that favors smaller keys over larger ones. We analyze zip-zip trees theoretically and empirically,…

Data Structures and Algorithms · Computer Science 2025-02-11 Ofek Gila , Michael T. Goodrich , Robert E. Tarjan

It has been known for almost three decades that many $\mathrm{NP}$-hard optimization problems can be solved in polynomial time when restricted to structures of constant treewidth. In this work we provide the first extension of such results…

Computational Complexity · Computer Science 2016-02-09 Mateus de Oliveira Oliveira

In this paper we describe an algorithm that embeds a graph metric $(V,d_G)$ on an undirected weighted graph $G=(V,E)$ into a distribution of tree metrics $(T,D_T)$ such that for every pair $u,v\in V$, $d_G(u,v)\leq d_T(u,v)$ and…

Data Structures and Algorithms · Computer Science 2017-05-29 Guy E. Blelloch , Yan Gu , Yihan Sun

We consider global problems, i.e. problems that take at least diameter time, even when the bandwidth is not restricted. We show that all problems considered admit efficient solutions in low-treewidth graphs. By ``efficient'' we mean that…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-05-31 Taisuke Izumi , Naoki Kitamura , Takamasa Naruse , Gregory Schwartzman

We consider preprocessing a set $S$ of $n$ points in convex position in the plane into a data structure supporting queries of the following form: given a point $q$ and a directed line $\ell$ in the plane, report the point of $S$ that is…

Computational Geometry · Computer Science 2017-10-16 Boris Aronov , Prosenjit Bose , Erik D. Demaine , Joachim Gudmundsson , John Iacono , Stefan Langerman , Michiel Smid

We give an O(sqrt n log n)-query quantum algorithm for evaluating size-n AND-OR formulas. Its running time is poly-logarithmically greater after efficient preprocessing. Unlike previous approaches, the algorithm is based on a quantum walk…

Quantum Physics · Physics 2011-10-11 Ben W. Reichardt

The wavelet tree has become a very useful data structure to efficiently represent and query large volumes of data in many different domains, from bioinformatics to geographic information systems. One problem with wavelet trees is their…

Data Structures and Algorithms · Computer Science 2016-10-20 José Fuentes-Sepúlveda , Erick Elejalde , Leo Ferres , Diego Seco

Suppose that we are given a string $s$ of length $n$ over an alphabet $\{0,1,\ldots,n^{O(1)}\}$ and $\delta$ is the string complexity of $s$, a known compression measure. We describe an index on $s$ with $O(\delta\log\frac{n}{\delta})$…

Data Structures and Algorithms · Computer Science 2026-04-15 Dmitry Kosolobov

Given an $n$-bit array $A$, the succinct rank data structure problem asks to construct a data structure using space $n+r$ bits for $r\ll n$, supporting rank queries of form $\mathtt{rank}(x)=\sum_{i=0}^{x-1} A[i]$. In this paper, we design…

Data Structures and Algorithms · Computer Science 2019-04-08 Huacheng Yu

We consider a recently introduced class of network construction problems where edges of a transportation network need to be constructed by a server (construction crew). The server has a constant construction speed which is much lower than…

Artificial Intelligence · Computer Science 2020-07-08 Igor Averbakh , Jordi Pereira

We deal with the problem of maintaining the suffix tree indexing structure for a fully-online collection of multiple strings, where a new character can be prepended to any string in the collection at any time. The only previously known…

Data Structures and Algorithms · Computer Science 2020-05-05 Shunsuke Inenaga

Motivated by an application in computational topology, we consider a novel variant of the problem of efficiently maintaining dynamic rooted trees. This variant requires merging two paths in a single operation. In contrast to the standard…

Data Structures and Algorithms · Computer Science 2007-11-13 Loukas Georgiadis , Haim Kaplan , Nira Shafrir , Robert E. Tarjan , Renato F. Werneck

We consider the problem of estimating the conditional probability of a label in time $O(\log n)$, where $n$ is the number of possible labels. We analyze a natural reduction of this problem to a set of binary regression problems organized in…

Machine Learning · Computer Science 2009-06-04 Alina Beygelzimer , John Langford , Yuri Lifshits , Gregory Sorkin , Alex Strehl

Quantum computing is a popular topic in computer science, which has recently attracted many studies in various areas such as machine learning and network. However, the topic of quantum data structures seems neglected. There is an open…

Databases · Computer Science 2024-06-03 Hao Liu , Xiaotian You , Raymond Chi-Wing Wong
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