English
Related papers

Related papers: Holographic Microscopy with Python and HoloPy

200 papers

Holography has emerged as a vital approach to fully engineer the wavefronts of light since its invention dating back to the last century. However, the typically large pixel size, small field of view and limited space-bandwidth impose…

Optics · Physics 2019-03-26 Lingling Huang , Shuang Zhang , Thomas Zentgraf

In this review article, we describe the role of holography in deciphering the physics of dense QCD matter, relevant for the description of compact stars and their binary mergers. We review the strengths and limitations of the holographic…

High Energy Physics - Theory · Physics 2022-07-13 Carlos Hoyos , Niko Jokela , Aleksi Vuorinen

Digital holography numerically restores three-dimensional image information using optically captured diffractive waves. The required bandwidth is larger than that of hologram pixel at a closer distance in the Fresnel diffraction regime,…

Optics · Physics 2024-01-12 Byung Gyu Chae

Colloidal suspensions are simple model systems for the study of phase transitions. Video microscopy is capable of directly imaging the structure and dynamics of colloidal suspensions in different phases. Recent results related to…

Soft Condensed Matter · Physics 2007-05-23 Piotr Habdas , Eric R. Weeks

Holographic information hiding is a technique for embedding holograms or images into another hologram, used for copyright protection and steganography of holograms. Using deep neural networks, we offer a way to improve the visual quality of…

Computer Vision and Pattern Recognition · Computer Science 2021-12-22 Tomoyoshi Shimobaba , Sota Oshima , Takashi Kakue , and Tomoyoshi Ito

One of the fundamental steps toward understanding a complex system is identifying variation at the scale of the system's components that is most relevant to behavior on a macroscopic scale. Mutual information provides a natural means of…

Machine Learning · Computer Science 2024-03-20 Kieran A. Murphy , Dani S. Bassett

Holographic particle characterization uses quantitative analysis of holographic microscopy data to precisely and rapidly measure the diameter and refractive index of individual colloidal spheres in their native media. When this technique is…

Soft Condensed Matter · Physics 2022-10-19 Rafe Abdulali , Lauren E. Altman , David G. Grier

Colloidoscope is a deep learning pipeline employing a 3D residual Unet architecture, designed to enhance the tracking of dense colloidal suspensions through confocal microscopy. This methodology uses a simulated training dataset that…

Holographic wavefront manipulation enables converting hair-thin multimode optical fibres into minimally invasive lensless imaging instruments conveying much higher information densities than conventional endoscopes. Their most prominent…

While clustering is one of the most popular methods for data mining, analysts lack adequate tools for quick, iterative clustering analysis, which is essential for hypothesis generation and data reasoning. We introduce Clustrophile, an…

Human-Computer Interaction · Computer Science 2017-10-09 Çağatay Demiralp

Three-dimension real-time tracking of single emitters is an emerging tool for assessment of biological behavior as intraneuronal transport, for which spatiotemporal resolution is crucial to understand the microscopic interactions between…

We develop an integrated system of holographic optical trapping and multimodal nonlinear microscopy and perform simultaneous three-dimensional optical manipulation and non-invasive structural imaging of composite soft-matter systems. We…

Soft Condensed Matter · Physics 2015-05-20 Rahul P. Trivedi , Taewoo Lee , Kris A. Bertness , Ivan I. Smalyukh

We present a simple and efficient method to simulate three-dimensional, complex-shaped, interacting bodies. The particle shape is represented by Minkowski operators. A time-continuous interaction between these bodies is derived using simple…

Materials Science · Physics 2008-11-20 Sergio-Andres Galindo-Torres , Fernando Alonso-Marroquin , Yucang Wang

We demonstrate numerical refocusing in coherent confocal laser scanning microscopy based on synthetic optical holography. This physics-based approach implements a computational propagation on the complex signal recovered in synthetic…

Modern imaging techniques at the molecular scale rely on utilizing novel coherent light sources like X-ray free electron lasers for the ultimate goal of visualizing such objects as individual biomolecules rather than crystals. Here, unlike…

We develop a framework for the derivation of new information theoretic quantities which are natural from a holographic perspective. We demonstrate the utility of our techniques by deriving the tripartite information (the quantity associated…

High Energy Physics - Theory · Physics 2018-12-05 Veronika E. Hubeny , Mukund Rangamani , Massimiliano Rota

X-ray astronomy is an important tool in the astrophysicist's toolkit to investigate high-energy astrophysical phenomena. Theoretical numerical simulations of astrophysical sources are fully three-dimensional representations of physical…

Instrumentation and Methods for Astrophysics · Physics 2015-02-18 John A. ZuHone , Veronica Biffi , Eric J. Hallman , Scott W. Randall , Adam R. Foster , Christian Schmid

Optical trapping can be used to manipulate the three-dimensional (3-D) motion of spherical particles based on the simple prediction of optical forces and the responding motion of samples. However, controlling the 3-D behaviour of…

Optics · Physics 2017-06-28 Kyoohyun Kim , YongKeun Park

Combine the scanning properties of a common office photocopier with an object in motion to create stunning imagery. Produce a scan or hard copy that records the artifact of two motions, the moving object and the moving photocopier scan bar.…

Physics Education · Physics 2018-12-27 Eric Muller

HoloTile is a patented computer generated holography approach with the aim of reducing the speckle noise caused by the overlap of the non-trivial physical extent of the point spread function in Fourier holographic systems from adjacent…

Optics · Physics 2024-02-16 Jesper Glückstad , Andreas Erik Gejl Madsen