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Related papers: MIST: A Simple and Efficient Molecular Dynamics Ab…

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Metal-insulator transition (MIT) materials are a useful platform for emerging microelectronic, optoelectronic, and neuromorphic devices, but their discovery is hindered by the high computational cost of electronic structure modeling, the…

The rapidly evolving landscape of AI and machine learning workloads has widened the gap between high-level domain operations and efficient hardware utilization. Achieving near-peak performance still demands deep hardware expertise-experts…

Machine Learning · Computer Science 2025-11-19 Arun Thangamani , Md Asghar Ahmad Shahid , Adam Siemieniuk , Rolf Morel , Renato Golin , Alexander Heinecke

This paper introduces TestIt, an open-source Python package designed to automate full-system integration testing using a Software-Based Self-Test (SBST) approach. By dynamically generating test vectors and golden references, TestIt…

Mixed Integer Linear Programs (MILP) are well known to be NP-hard (Non-deterministic Polynomial-time hard) problems in general. Even though pure optimization-based methods, such as constraint generation, are guaranteed to provide an optimal…

Optimization and Control · Mathematics 2022-07-18 Asunción Jiménez-Cordero , Juan Miguel Morales , Salvador Pineda

The von Neumann architecture, in which the memory and the computation units are separated, demands massive data traffic between the memory and the CPU. To reduce data movement, new technologies and computer architectures have been explored.…

Emerging Technologies · Computer Science 2022-09-01 Adi Eliahu , Rotem Ben-Hur , Ronny Ronen , Shahar Kvatinsky

We present a subgrid-scale model for the Multi-phase Interstellar medium, Star formation, and Turbulence (MIST) and explore its behaviour in high-resolution large-eddy simulations of isolated disc galaxies. MIST follows the evolution of a…

Astrophysics of Galaxies · Physics 2015-06-19 Harald Braun , Wolfram Schmidt , Jens C. Niemeyer , Ann S. Almgren

In this talk I discuss the general question of the portability of Molecular Dynamics codes for diffusive systems on parallel computers of the APE family. The intrinsic single precision arithmetics of the today available APE platforms does…

Biological Physics · Physics 2009-10-30 G. La Penna , S. Letardi , V. Minicozzi , S. Morante , G. C. Rossi , G. Salina

A nanoscale-sized Stirling engine with an atomistic working fluid has been modeled using molecular dynamics simulation. The design includes heat exchangers based on thermostats, pistons attached to a flywheel under load, and a regenerator.…

Computational Physics · Physics 2009-05-03 D. C. Rapaport

This work presents MLIR, a novel approach to building reusable and extensible compiler infrastructure. MLIR aims to address software fragmentation, improve compilation for heterogeneous hardware, significantly reduce the cost of building…

Pretraining vision transformers (ViT) with attention guided masked image modeling (MIM) has shown to increase downstream accuracy for natural image analysis. Hierarchical shifted window (Swin) transformer, often used in medical image…

Computer Vision and Pattern Recognition · Computer Science 2024-07-04 Jue Jiang , Aneesh Rangnekar , Chloe Min Seo Choi , Harini Veeraraghavan

Message Passing Interface (MPI) has been a well-established technology in the domain of distributed high-performance computing for several decades. However, one of its greatest drawbacks is a rather ancient pure-C interface. It lacks many…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-10-21 Jiří Klepl , Martin Kruliš , Matyáš Brabec

Path-integral molecular dynamics (PIMD) simulations are crucial for accurately capturing nuclear quantum effects in materials. However, their computational intensity and reliance on multiple software packages often limit their applicability…

We discuss the computational bottlenecks in molecular dynamics (MD) and describe the challenges in parallelizing the computation intensive tasks. We present a hybrid algorithm using MPI (Message Passing Interface) with OpenMP threads for…

Computational Physics · Physics 2015-07-28 Anirban Pal , Abhishek Agarwala , Soumyendu Raha , Baidurya Bhattacharya

Reactive molecular dynamics simulations are computationally demanding. Reaching spatial and temporal scales where interesting scientific phenomena can be observed requires efficient and scalable implementations on modern hardware. In this…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-06-26 Hasan Metin Aktulga , Christopher Knight , Paul Coffman , Kurt A. O'Hearn , Tzu-Ray Shan , Wei Jiang

We describe an implementation of compressible inviscid fluid solvers with block-structured adaptive mesh refinement on Graphics Processing Units using NVIDIA's CUDA. We show that a class of high resolution shock capturing schemes can be…

Cosmology and Nongalactic Astrophysics · Physics 2014-11-20 Peng Wang , Tom Abel , Ralf Kaehler

Graphic design creation involves harmoniously assembling multimodal components such as images, text, logos, and other visual assets collected from diverse sources, into a visually-appealing and cohesive design. Recent methods have largely…

Computer Vision and Pattern Recognition · Computer Science 2026-04-20 Abhinav Mahajan , Abhikhya Tripathy , Sudeeksha Reddy Pala , Vaibhav Methi , K J Joseph , Balaji Vasan Srinivasan

Heterogeneous multiscale methods (HMM) combine molecular accuracy of particle-based simulations with the computational efficiency of continuum descriptions to model flow in soft matter liquids. In these schemes, molecular simulations…

Application-Specific Instruction-Set Processors (ASIPs) built on the RISC-V architecture offer specialization opportunities for various applications. Existing frameworks are largely designed around fixed instruction extension interfaces and…

Hardware Architecture · Computer Science 2026-04-21 Yuyang Zou , Youwei Xiao , Chenyun Yin , Yansong Xu , Yuhao Luo , Yitian Sun , Ruifan Xu , Renze Chen , Yun Liang

The Parameter-Efficient Fine-Tuning (PEFT) method, which adjusts or introduces fewer trainable parameters to calibrate pre-trained models on downstream tasks, has become a recent research interest. However, existing PEFT methods within the…

Computation and Language · Computer Science 2023-12-13 Jiacheng Ruan , Jingsheng Gao , Mingye Xie , Suncheng Xiang , Zefang Yu , Ting Liu , Yuzhuo Fu

Mata is a well-engineered automata library written in C++ that offers a unique combination of speed and simplicity. It is meant to serve in applications such as string constraint solving and reasoning about regular expressions, and as…

Formal Languages and Automata Theory · Computer Science 2024-03-29 David Chocholatý , Tomáš Fiedor , Vojtěch Havlena , Lukáš Holík , Martin Hruška , Ondřej Lengál , Juraj Síč