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Related papers: Characterizing Information Propagation in Plants

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Concentration modulation, whereby information is encoded in the concentration level of chemicals, is considered. One of the main challenges with such systems is the limited control the transmitter has on the concentration level at the…

Emerging Technologies · Computer Science 2015-12-01 Nariman Farsad , Andrea Goldsmith

Communication of information in complex systems can be considered as major driver of systems evolution. What matters is not the communicated information by itself but rather the meaning that is supplied to the information. However…

Computers and Society · Computer Science 2023-04-28 Inga Ivanova

Disease spread in most biological populations requires the proximity of agents. In populations where the individuals have spatial mobility, the contact graph is generated by the "collision dynamics" of the agents, and thus the evolution of…

Physics and Society · Physics 2007-06-07 Z. Toroczkai , H. Guclu

Central to the functioning of a living cell is its ability to control the readout or expression of information encoded in the genome. In many cases, a single transcription factor protein activates or represses the expression of many genes.…

Molecular Networks · Quantitative Biology 2013-05-29 Aleksandra M. Walczak , Gapser Tkacik , William Bialek

Biological systems are known to communicate by diffusing chemical signals in the surrounding medium. However, most of the recent literature has neglected the electron transfer mechanism occurring amongst living cells, and its role in…

Emerging Technologies · Computer Science 2015-02-23 Nicolo Michelusi , Sahand Pirbadian , Mohamed Y. El-Naggar , Urbashi Mitra

Biochemical networks can respond to temporal characteristics of time-varying signals. To understand how reliably biochemical networks can transmit information we must consider how an input signal as a function of time--the input…

Molecular Networks · Quantitative Biology 2015-05-13 Filipe Tostevin , Pieter Rein ten Wolde

Inspired by biological communication systems, molecular communication has been proposed as a viable scheme to communicate between nano-sized devices separated by a very short distance. Here, molecules are released by the transmitter into…

Biological Physics · Physics 2016-11-15 Sachin Kadloor , Raviraj S. Adve , Andrew W. Eckford

In this paper, we introduce a mathematical approach for system-level analysis and optimization of densely deployed multiple-antenna cellular networks, where low-energy devices are capable of decoding information data and harvesting power…

Information Theory · Computer Science 2016-08-30 Lam Thanh Tu , Marco Di Renzo , Justin P. Coon

This paper presents a method for shaping the transmit pulse of a molecular signal such that the diffusion channel's response is a sharp pulse. The impulse response of a diffusion channel is typically characterised as having an infinitely…

Emerging Technologies · Computer Science 2016-11-17 Siyi Wang , Weisi Guo , Mark D. McDonnell

We explore the critical behaviors in the dynamics of information transfer of a biologically-inspired system by an individual-based model. "Quorum response", a type of social interaction which has been recognized taxonomically in animal…

Physics and Society · Physics 2013-08-22 Collin Feng Hu

Given the stochastic nature of gene expression, genetically identical cells exposed to the same environmental inputs will produce different outputs. This heterogeneity has been hypothesized to have consequences for how cells are able to…

Molecular Networks · Quantitative Biology 2020-08-19 Manuel Razo-Mejia , Sarah Marzen , Griffin Chure , Rachel Taubman , Muir Morrison , Rob Phillips

Plant hormone auxin has critical roles in plant growth, dependent on its heterogeneous distribution in plant tissues. Exactly how auxin transport and developmental processes such as growth coordinate to achieve the precise patterns of auxin…

Tissues and Organs · Quantitative Biology 2019-11-14 Henry R. Allen , Mariya Ptashnyk

At present, multi-electrode array (MEA) approach and optical recording allow us to acquire plant electrical activity with higher spatio-temporal resolution. To understand the dynamic information flow of the electrical signaling system and…

Neurons and Cognition · Quantitative Biology 2017-04-03 Yang Chen , Dong-Jie Zhao , Chao Song , Wei-He Liu , Zi-Yang Wang , Zhong-Yi Wang , Guiliang Tang , Lan Huang

A major obstacle in analyzing the evolution of information exchange and processing is our insufficient understanding of the underlying signaling and decision-making biological mechanisms. For instance, it is unclear why are humans unique in…

Populations and Evolution · Quantitative Biology 2008-09-06 A. Feigel

Living systems relay information across membrane interfaces to coordinate compartment functions. We identify a physical mechanism for selective information transmission that arises from the sigmoidal response of surface-bound particle…

Statistical Mechanics · Physics 2025-12-29 Jenna Elliott , Hiral Shah , Roman Belousov , Gautam Dey , Anna Erzberger

Widespread interest in the diffusion of information through social networks has produced a large number of Social Dynamics models. A majority of them use theoretical hypothesis to explain their diffusion mechanisms while the few empirically…

Physics and Society · Physics 2011-05-18 José Luis Iribarren , Esteban Moro

Plants, being sessile organisms, have evolved a variety of defense mechanisms to protect themselves from invaders such as pathogens, insects, and herbivores. One key strategy is the release of volatile organic compounds (VOCs) into the air,…

Other Quantitative Biology · Quantitative Biology 2025-08-25 Mridul Kumar , Soami Daya Krishnananda

Information molecules play a crucial role in molecular communication (MC), acting as carriers for information transfer. A common approach to get information molecules in MC involves harvesting them from the environment; however, the…

Information Theory · Computer Science 2025-08-08 Dongliang Jing , Linjuan Li , Zhen Cheng , Lin Lin , Andrew W. Eckford

Nowadays, one of the challenges we face when carrying out modeling of epidemic spreading is to develop methods to control disease transmission. In this article we study how the spreading of knowledge of a disease affects the propagation of…

The dynamics of a packages diffusion process within a selforganized network is analytically studied by means of an extended $f$% -spin facilitated kinetic Ising model (Fredrickson-Andersen model) using a Fock-space representation for the…

Statistical Mechanics · Physics 2009-11-07 C. Pigorsch , S. Trimper