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Colloidoscope is a deep learning pipeline employing a 3D residual Unet architecture, designed to enhance the tracking of dense colloidal suspensions through confocal microscopy. This methodology uses a simulated training dataset that…

In this paper, we adopt 3D Convolutional Neural Networks to segment volumetric medical images. Although deep neural networks have been proven to be very effective on many 2D vision tasks, it is still challenging to apply them to 3D tasks…

Computer Vision and Pattern Recognition · Computer Science 2018-08-03 Zhuotun Zhu , Yingda Xia , Wei Shen , Elliot K. Fishman , Alan L. Yuille

In videos, the human's actions are of three-dimensional (3D) signals. These videos investigate the spatiotemporal knowledge of human behavior. The promising ability is investigated using 3D convolution neural networks (CNNs). The 3D CNNs…

Computer Vision and Pattern Recognition · Computer Science 2022-07-26 Arslan Syed , Eman A. Aldhahri , Muhammad Munawar Iqbal , Abid Ali , Ammar Muthanna , Harun Jamil , Faisal Jamil

Increasing demand for understanding the vast heterogeneity of cellular phenotypes has driven the development of imaging flow cytometry (IFC), that combines features of flow cytometry with fluorescence and bright field microscopy. IFC…

Quantitative Methods · Quantitative Biology 2019-02-06 Yuanyuan Han , Rui Tang , Yi Gu , Alex Ce Zhang , Wei Cai , Violet Castor , Sung Hwan Cho , William Alaynick , Yu-Hwa Lo

The automated analysis of microscopy images is a challenge in the context of single-cell tracking and quantification. This work has as goals the study of the performance of deep learning for segmenting microscopy images and the improvement…

Quantitative Methods · Quantitative Biology 2022-10-05 André O. Françani

During the last years, deep learning trackers achieved stimulating results while bringing interesting ideas to solve the tracking problem. This progress is mainly due to the use of learned deep features obtained by training deep…

Computer Vision and Pattern Recognition · Computer Science 2020-12-24 Ahmed Zgaren , Wassim Bouachir , Riadh Ksantini

Deep learning architectures are showing great promise in various computer vision domains including image classification, object detection, event detection and action recognition. In this study, we investigate various aspects of…

Computer Vision and Pattern Recognition · Computer Science 2016-08-08 Hilal Ergun , Mustafa Sert

Image segmentation is considered to be one of the critical tasks in hyperspectral remote sensing image processing. Recently, convolutional neural network (CNN) has established itself as a powerful model in segmentation and classification by…

Computer Vision and Pattern Recognition · Computer Science 2017-12-29 Fahim Irfan Alam , Jun Zhou , Alan Wee-Chung Liew , Xiuping Jia , Jocelyn Chanussot , Yongsheng Gao

Accurate localization of proteins from fluorescence microscopy images is challenging due to the inter-class similarities and intra-class disparities introducing grave concerns in addressing multi-class classification problems. Conventional…

Computer Vision and Pattern Recognition · Computer Science 2021-10-11 Muhammad Tahir , Saeed Anwar , Ajmal Mian , Abdul Wahab Muzaffar

Deep learning using Convolutional Neural Networks (CNNs) has been shown to significantly out-performed many conventional vision algorithms. Despite efforts to increase the CNN efficiency both algorithmically and with specialized hardware,…

Computer Vision and Pattern Recognition · Computer Science 2021-05-24 Carlos Mauricio Villegas Burgos , Tianqi Yang , Nick Vamivakas , Yuhao Zhu

We present an automated method to track and identify neurons in C. elegans, called "fast Deep Learning Correspondence" or fDLC, based on the transformer network architecture. The model is trained once on empirically derived synthetic data…

Quantitative Methods · Quantitative Biology 2021-07-16 Xinwei Yu , Matthew S. Creamer , Francesco Randi , Anuj K. Sharma , Scott W. Linderman , Andrew M. Leifer

To phased microphone array for sound source localization, algorithm with both high computational efficiency and high precision is a persistent pursuit. In this paper convolutional neural network (CNN) a kind of deep learning is…

Audio and Speech Processing · Electrical Eng. & Systems 2018-02-14 Wei Ma , Xun Liu

Recent advances in artificial intelligence (AI), specifically in computer vision (CV) and deep learning (DL), have created opportunities for novel systems in many fields. In the last few years, deep learning applications have demonstrated…

Computer Vision and Pattern Recognition · Computer Science 2018-03-15 Krunoslav Vinicki , Pierluigi Ferrari , Maja Belic , Romana Turk

Building large models with parameter sharing accounts for most of the success of deep convolutional neural networks (CNNs). In this paper, we propose doubly convolutional neural networks (DCNNs), which significantly improve the performance…

Machine Learning · Computer Science 2016-11-01 Shuangfei Zhai , Yu Cheng , Weining Lu , Zhongfei Zhang

Uncovering the heterogeneity of cell populations is a long-standing goal in fields ranging from antimicrobial resistance to cancer research. Emerging technology platforms such as droplet microfluidics hold the promise to decipher cellular…

Image and Video Processing · Electrical Eng. & Systems 2020-01-29 Vasileios Anagnostidis , Benjamin Sherlock , Jeremy Metz , Philip Mair , Florian Hollfelder , Fabrice Gielen

Convolutional Neural Network (CNN)-based machine learning systems have made breakthroughs in feature extraction and image recognition tasks in two dimensions (2D). Although there is significant ongoing work to apply CNN technology to…

Computer Vision and Pattern Recognition · Computer Science 2018-02-26 Thomas Corcoran , Rafael Zamora-Resendiz , Xinlian Liu , Silvia Crivelli

Convolutional neural networks (CNNs) have been extensively applied for image recognition problems giving state-of-the-art results on recognition, detection, segmentation and retrieval. In this work we propose and evaluate several deep…

Computer Vision and Pattern Recognition · Computer Science 2015-04-14 Joe Yue-Hei Ng , Matthew Hausknecht , Sudheendra Vijayanarasimhan , Oriol Vinyals , Rajat Monga , George Toderici

Convolutional Neural Networks (CNNs) are a standard approach for visual recognition due to their capacity to learn hierarchical representations from raw pixels. In practice, practitioners often choose among (i) training a compact custom CNN…

Computer Vision and Pattern Recognition · Computer Science 2026-01-06 Annoor Sharara Akhand

Convolutional Neural Networks (CNNs) have recently been shown to excel at performing visual place recognition under changing appearance and viewpoint. Previously, place recognition has been improved by intelligently selecting relevant…

Robotics · Computer Science 2018-10-31 Stephen Hausler , Adam Jacobson , Michael Milford

Successfully tracking the human body is an important perceptual challenge for robots that must work around people. Existing methods fall into two broad categories: geometric tracking and direct pose estimation using machine learning. While…

Computer Vision and Pattern Recognition · Computer Science 2019-08-06 Weilin Wan , Aaron Walsman , Dieter Fox