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In this paper, we propose algorithms for the graph isomorphism (GI) problem that are based on the eigendecompositions of the adjacency matrices. The eigenvalues of isomorphic graphs are identical. However, two graphs $ G_A $ and $ G_B $ can…

Discrete Mathematics · Computer Science 2019-08-14 Stefan Klus , Tuhin Sahai

For a graph invariant $\pi$, the Contraction($\pi$) problem consists in, given a graph $G$ and two positive integers $k,d$, deciding whether one can contract at most $k$ edges of $G$ to obtain a graph in which $\pi$ has dropped by at least…

Data Structures and Algorithms · Computer Science 2021-03-23 Paloma T. Lima , Vinicius F. dos Santos , Ignasi Sau , Uéverton S. Souza

Problems related to graph matching and isomorphisms are very important both from a theoretical and practical perspective, with applications ranging from image and video analysis to biological and biomedical problems. The graph matching…

Combinatorics · Mathematics 2014-09-29 Marcelo Fiori , Guillermo Sapiro

This paper deals with the problem of graph matching or network alignment for Erd\H{o}s--R\'enyi graphs, which can be viewed as a noisy average-case version of the graph isomorphism problem. Let $G$ and $G'$ be $G(n, p)$ Erd\H{o}s--R\'enyi…

Statistics Theory · Mathematics 2022-07-08 Cheng Mao , Mark Rudelson , Konstantin Tikhomirov

The graph isomorphism (GI) problem, which asks whether two graphs are structurally identical, occupies a unique position in computational complexity -- it is neither known to be solvable in polynomial time, nor proven to be NP-complete. We…

Optimization and Control · Mathematics 2026-05-21 Wenjie Xiao , Mathieu Besançon , Patrick Gelß , Deborah Hendrych , Stefan Klus , Sebastian Pokutta

Let $G$ and $H$ be two simple graphs. A bijection $\phi:V(G)\rightarrow V(H)$ is called an isomorphism between $G$ and $H$ if $(\phi v_i)(\phi v_j)\in E(H)$ $\Leftrightarrow$ $v_i v_j\in E(G)$, $\forall v_i,v_j \in V(G)$. In the case that…

Combinatorics · Mathematics 2017-10-27 Wenxue Du

We introduce Permutation and Structured Perturbation Inference (PSPI), a new problem formulation that abstracts many graph matching tasks that arise in systems biology. PSPI can be viewed as a robust formulation of the permutation inference…

Artificial Intelligence · Computer Science 2021-04-05 Raghvendra Mall , Shameem A. Parambath , Han Yufei , Ting Yu , Sanjay Chawla

For a fixed "pattern" graph $G$, the $\textit{colored $G$-subgraph isomorphism problem}$ (denoted $\mathrm{SUB}(G)$) asks, given an $n$-vertex graph $H$ and a coloring $V(H) \to V(G)$, whether $H$ contains a properly colored copy of $G$.…

Computational Complexity · Computer Science 2020-04-29 Deepanshu Kush , Benjamin Rossman

What is the best way to match the nodes of two graphs? This graph alignment problem generalizes graph isomorphism and arises in applications from social network analysis to bioinformatics. Some solutions assume that auxiliary information on…

Information Retrieval · Computer Science 2021-06-14 Judith Hermanns , Anton Tsitsulin , Marina Munkhoeva , Alex Bronstein , Davide Mottin , Panagiotis Karras

Representing a graph as a vector is a challenging task; ideally, the representation should be easily computable and conducive to efficient comparisons among graphs, tailored to the particular data and analytical task at hand. Unfortunately,…

Social and Information Networks · Computer Science 2018-11-16 Anton Tsitsulin , Davide Mottin , Panagiotis Karras , Alex Bronstein , Emmanuel Müller

Subgraph Isomorphism is a very basic graph problem, where given two graphs $G$ and $H$ one is to check whether $G$ is a subgraph of $H$. Despite its simple definition, the Subgraph Isomorphism problem turns out to be very broad, as it…

Data Structures and Algorithms · Computer Science 2015-04-14 Marek Cygan , Jakub Pachocki , Arkadiusz Socała

Graph matching aims at finding the vertex correspondence between two unlabeled graphs that maximizes the total edge weight correlation. This amounts to solving a computationally intractable quadratic assignment problem. In this paper we…

Machine Learning · Statistics 2019-07-23 Zhou Fan , Cheng Mao , Yihong Wu , Jiaming Xu

A permutation graph $G_\pi$ is a simple graph with vertices corresponding to the elements of $\pi$ and an edge between $i$ and $j$ when $i$ and $j$ are inverted in $\pi$. A set of vertices $D$ is said to dominate a graph $G$ when every…

The Subgraph Isomorphism problem asks, given a host graph G on n vertices and a pattern graph P on k vertices, whether G contains a subgraph isomorphic to P. The restriction of this problem to planar graphs has often been considered. After…

Discrete Mathematics · Computer Science 2015-03-19 Paul Bonsma

The Surjective Homomorphism problem is to test whether a given graph G called the guest graph allows a vertex-surjective homomorphism to some other given graph H called the host graph. The bijective and injective homomorphism problems can…

Discrete Mathematics · Computer Science 2016-12-16 Petr A. Golovach , Bernard Lidický , Barnaby Martin , Daniël Paulusma

In this article we consider the graph alignment problem from the perspective of high-dimensional statistics: we aim to estimate an unknown permutation $\pi^*$ from the observation of two correlated random adjacency matrices $A_1$, $A_2$. We…

Probability · Mathematics 2025-10-30 Laurent Massoulié

Can one reduce the size of a graph without significantly altering its basic properties? The graph reduction problem is hereby approached from the perspective of restricted spectral approximation, a modification of the spectral similarity…

Data Structures and Algorithms · Computer Science 2019-01-01 Andreas Loukas

It is well-known [KST93] that the complexity of the Graph Automorphism problem is characterized by a special case of Graph Isomorphism, where the input graphs satisfy the "promise" of being rigid (that is, having no nontrivial…

Computational Complexity · Computer Science 2018-04-03 Eric Allender , Joshua A. Grochow , Dieter van Melkebeek , Cristopher Moore , Andrew Morgan

A graph $G$ covers a graph $H$ if there exists a locally bijective homomorphism from $G$ to $H$. We deal with regular covers where this homomorphism is prescribed by the action of a semiregular subgroup of $\textrm{Aut}(G)$. We study…

Discrete Mathematics · Computer Science 2017-01-31 Jiří Fiala , Pavel Klavík , Jan Kratochvíl , Roman Nedela

We introduce the Multicolored Graph Realization problem (MGRP). The input to the problem is a colored graph $(G,\varphi)$, i.e., a graph together with a coloring on its vertices. We can associate to each colored graph a cluster graph…

Computational Complexity · Computer Science 2021-03-25 Josep Díaz , Öznur Yaşar Diner , Maria Serna , Oriol Serra
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