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Given a set of finite words, the Overlap Graph (OG) is a complete weighted digraph where each word is a node and where the weight of an arc equals the length of the longest overlap of one word onto the other (Overlap is an asymmetric…

Data Structures and Algorithms · Computer Science 2021-11-18 Bastien Cazaux , Eric Rivals

A word is said to be \emph{bordered} if it contains a non-empty proper prefix that is also a suffix. We can naturally extend this definition to pairs of non-empty words. A pair of words $(u,v)$ is said to be \emph{mutually bordered} if…

Discrete Mathematics · Computer Science 2022-06-30 Daniel Gabric

Overlap-free words are words over the binary alphabet $A=\{a, b\}$ that do not contain factors of the form $xvxvx$, where $x \in A$ and $v \in A^*$. We analyze the asymptotic growth of the number $u_n$ of overlap-free words of length $n$ as…

Discrete Mathematics · Computer Science 2007-09-13 Raphael M. Jungers , Vladimir Y. Protasov , Vincent D. Blondel

Lambda words are sequences obtained by encoding the differences between ordered elements of the form i+j\theta, where i and j are non-negative integers and 1 < \theta <2. Lambda words are right-infinite words defined over an infinite…

Combinatorics · Mathematics 2013-03-12 Norman Carey

The \emph{Hamming distance} $\text{ham}(u,v)$ between two equal-length words $u$, $v$ is the number of positions where $u$ and $v$ differ. The words $u$ and $v$ are said to be \emph{conjugates} if there exist non-empty words $x,y$ such that…

Combinatorics · Mathematics 2022-03-15 Daniel Gabric

A gapped repeat (respectively, palindrome) occurring in a word $w$ is a factor $uvu$ (respectively, $u^Rvu$) of $w$. In such a repeat (palindrome) $u$ is called the arm of the repeat (respectively, palindrome), while $v$ is called the gap.…

Data Structures and Algorithms · Computer Science 2023-06-22 Marius Dumitran , Paweł Gawrychowski , Florin Manea

We consider words over a binary alphabet. A word $w$ is overlap-free if it does not have factors (blocks of consecutive letters) of the form $uvuvu$ for nonempty $u$. Let $M(w)$ denote the number of positions that are middle positions of…

Combinatorics · Mathematics 2021-08-11 Tero Harju

In this paper we compare two finite words $u$ and $v$ by the lexicographical order of the infinite words $u^\omega$ and $v^\omega$. Informally, we say that we compare $u$ and $v$ by the infinite order. We show several properties of Lyndon…

Discrete Mathematics · Computer Science 2019-04-02 Francesco Dolce , Antonio Restivo , Christophe Reutenauer

For $\alpha\geq 1$, an $\alpha$-gapped repeat in a word $w$ is a factor $uvu$ of $w$ such that $|uv|\leq \alpha |u|$; the two factors $u$ in such a repeat are called arms, while the factor $v$ is called gap. Such a repeat is called maximal…

Data Structures and Algorithms · Computer Science 2015-10-01 Paweł Gawrychowski , Tomohiro I , Shunsuke Inenaga , Dominik Köppl , Florin Manea

An overlap-free (or $\beta$-free) word $w$ over a fixed alphabet $\Sigma$ is extremal if every word obtained from $w$ by inserting a single letter from $\Sigma$ at any position contains an overlap (or a factor of exponent at least $\beta$,…

Combinatorics · Mathematics 2020-06-19 Lucas Mol , Narad Rampersad , Jeffrey Shallit

We investigate the relationship between finite terms in {\lambda}-letrec, the {\lambda}-calculus with letrec, and the infinite {\lambda}-terms they express. We say that a lambda-letrec term expresses a lambda-term if the latter can be…

Programming Languages · Computer Science 2016-10-20 Jan Rochel

A finite word $f$ is Hamming-isometric if for any two word $u$ and $v$ of same length avoiding $f$, $u$ can be transformed into $v$ by changing one by one all the letters on which $u$ differs from $v$, in such a way that all of the new…

Data Structures and Algorithms · Computer Science 2022-08-09 Marie-Pierre Béal , Maxime Crochemore

Given a nonempty finite word $v$, let $PL(v)$ be the palindromic length of $v$; it means the minimal number of palindromes whose concatenation is equal to $v$. Let $v^R$ denote the reversal of $v$. Given a finite or infinite word $y$, let…

Combinatorics · Mathematics 2022-07-19 Josef Rukavicka

An edit distance is a metric between words that quantifies how two words differ by counting the number of edit operations needed to transform one word into the other one. A word f is said isometric with respect to an edit distance if, for…

Formal Languages and Automata Theory · Computer Science 2023-03-07 Marcella Anselmo , Giuseppa Castiglione , Manuela Flores , Dora Giammarresi , Maria Madonia , Sabrina Mantaci

For any functions $f(x)$, $g(x)$ from $\mathbb {N}$ to $\mathbb {R}$ we call repeats $uvu$ such that $g(|u|)\le |v|\le f(|u|)$ as {\it $f,g$-gapped repeats}. We study the possible number of $f,g$-gapped repeats in words of fixed length~$n$.…

Formal Languages and Automata Theory · Computer Science 2017-01-06 Roman Kolpakov

Overlaps between words are crucial in many areas of computer science, such as code design, stringology, and bioinformatics. A self overlapping word is characterized by its periods and borders. A period of a word $u$ is the starting position…

Discrete Mathematics · Computer Science 2025-02-19 Eric Rivals

A gapped repeat is a factor of the form $uvu$ where $u$ and $v$ are nonempty words. The period of the gapped repeat is defined as $|u|+|v|$. The gapped repeat is maximal if it cannot be extended to the left or to the right by at least one…

Formal Languages and Automata Theory · Computer Science 2013-10-01 Roman Kolpakov , Mikhail Podolskiy , Mikhail Posypkin , Nickolay Khrapov

Let $A$ and $B$ be sets of words of length $n$ over some finite alphabet. Suppose that no suffix of a word in $A$ coincides with a prefix of a word in $B$. Then we show that the product of densities of $A$ and $B$ is upper bounded by…

Combinatorics · Mathematics 2026-03-04 Dmitrii Zakharov

We consider avoiding squares and overlaps over the natural numbers, using a greedy algorithm that chooses the least possible integer at each step; the word generated is lexicographically least among all such infinite words. In the case of…

Combinatorics · Mathematics 2009-04-12 Mathieu Guay-Paquet , Jeffrey Shallit

A correlation is a binary vector that encodes all possible positions of overlaps of two words, where an overlap for an ordered pair of words (u,v) occurs if a suffix of word u matches a prefix of word v. As multiple pairs can have the same…

Discrete Mathematics · Computer Science 2025-06-03 Eric Rivals , Pengfei Wang
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