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Pairwise models are used widely to model epidemic spread on networks. These include the modelling of susceptible-infected-removed (SIR) epidemics on regular networks and extensions to SIS dynamics and contact tracing on more exotic networks…

Populations and Evolution · Quantitative Biology 2018-09-24 István Z. Kiss , Joel C. Miller , Péter L. Simon

Very large time series are increasingly available from an ever wider range of IoT-enabled sensors, from which significant insights can be obtained through mining temporal patterns from them. A useful type of patterns found in many…

Databases · Computer Science 2023-01-10 Van Long Ho , Nguyen Ho , Torben Bach Pedersen

Ecosystems can undergo sudden shifts to undesirable states, but recent studies with simple single species ecosystems have demonstrated that advance warning can be provided by the slowing down of population dynamics near a tipping point.…

Populations and Evolution · Quantitative Biology 2015-06-16 Andrew Chen , Alvaro Sanchez , Lei Dai , Jeff Gore

We introduce and analyse an individual-based evolutionary model, in which a population of genetically diverse organisms compete with each other for limited resources. Through theoretical analysis and stochastic simulations, we show that the…

Populations and Evolution · Quantitative Biology 2012-11-02 Tim Rogers , Alan J. McKane , Axel G. Rossberg

Classical ecological theory predicts that environmental stochasticity increases extinction risk by reducing the average per-capita growth rate of populations. To understand the interactive effects of environmental stochasticity, spatial…

Probability · Mathematics 2015-12-16 Steven N. Evans , Peter L. Ralph , Sebastian J. Schreiber , Arnab Sen

We study how environmental stochasticity influences the long-term population size in certain one- and two-species models. The difficulty is that even when one can prove that there is persistence, it is usually impossible to say anything…

Populations and Evolution · Quantitative Biology 2025-07-15 Alexandru Hening , Siddharth Sabharwal

Understanding the mechanisms of species coexistence has always been a fundamental topic in ecology. Classical theory predicts that interspecific competition may select for traits that stabilize niche differences, although recent work shows…

Populations and Evolution · Quantitative Biology 2023-05-16 José F. Fontanari , Margarida Matos , Mauro Santos

Stochastic models of diffusion with excluded-volume effects are used to model many biological and physical systems at a discrete level. The average properties of the population may be described by a continuum model based on partial…

Chemical Physics · Physics 2012-12-20 Maria Bruna , S. Jonathan Chapman

According to the competitive exclusion principle, in a finite ecosystem, extinction occurs naturally when two or more species compete for the same resources. An important question that arises is: when coexistence is not possible, which…

Populations and Evolution · Quantitative Biology 2017-08-16 Marcelo Martins de Oliveira , Ronald Dickman

Probabilistic forecasting consists in predicting a distribution of possible future outcomes. In this paper, we address this problem for non-stationary time series, which is very challenging yet crucially important. We introduce the STRIPE…

Machine Learning · Statistics 2021-04-13 Vincent Le Guen , Nicolas Thome

We study evolutionary game dynamics in finite populations. We analyze an evolutionary process, which we call pairwise comparison, for which we adopt the ubiquitous Fermi distribution function from statistical mechanics. The inverse…

Populations and Evolution · Quantitative Biology 2007-05-23 Arne Traulsen , Martin A. Nowak , Jorge M. Pacheco

A major challenge for community ecology is using spatio-temporal data to infer parameters of dynamical models without conducting laborious experiments. We present a novel framework from statistical physics -- Maximum Caliber -- to…

Populations and Evolution · Quantitative Biology 2025-11-07 Zachary Jackson , Mathew A. Leibold , Robert D. Holt , BingKan Xue

We consider a trait-structured population subject to mutation, birth and competition of logistic type, where the number of coexisting types may fluctuate. Applying a limit of rare mutations to this population while keeping the population…

Probability · Mathematics 2011-12-05 Nicolas Champagnat , Amaury Lambert

Recently, there has been a growing interest in developing inventory control policies which are robust to model misspecification. One approach is to posit that nature selects a worst-case distribution for any stochastic primitives from some…

Optimization and Control · Mathematics 2018-08-21 Linwei Xin , David A. Goldberg

We consider a parameter dependent periodic-logistic problem with a logistic term involving a degeneracy that replicates time dependent refuges in the habitat of a population. Working under no or very minimal assumptions on the boundary…

Analysis of PDEs · Mathematics 2025-02-21 Daniel Daners , Zeaiter Zeaiter

Resource competition is a fundamental interaction in natural communities.However little is known about competition in spatial environments where organisms are able to regulate resource distributions. Here, we analyze the competition of two…

Populations and Evolution · Quantitative Biology 2011-02-24 Alexei B. Ryabov , Bernd Blasius

The existence of the {\em typical set} is key for data compression strategies and for the emergence of robust statistical observables in macroscopic physical systems. Standard approaches derive its existence from a restricted set of…

Statistical Mechanics · Physics 2022-02-10 Rudolf Hanel , Bernat Corominas-Murtra

We extend the theory of spectral submanifolds (SSMs) to general non-autonomous dynamical systems that are either weakly forced or slowly varying. Examples of such systems arise in structural dynamics, fluid-structure interactions and…

Dynamical Systems · Mathematics 2024-04-09 George Haller , Roshan S. Kaundinya

We consider a population structured by a spacevariable and a phenotypical trait, submitted to dispersion,mutations, growth and nonlocal competition. This population is facing an {\it environmental gradient}: to survive at location $x$, an…

Analysis of PDEs · Mathematics 2021-01-21 Matthieu Alfaro , Gwenaël Peltier

Empirical observations show that ecological communities can have a huge number of coexisting species, also with few or limited number of resources. These ecosystems are characterized by multiple type of interactions, in particular…

Populations and Evolution · Quantitative Biology 2018-05-18 Chengyi Tu , Samir Suweis , Jacopo Grillib , Marco Formentin , Amos Maritan
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