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Identification of attractors, that is, stable states and sustained oscillations, is an important step in the analysis of Boolean models and exploration of potential variants. We describe an approach to the search for asynchronous cyclic…

Discrete Mathematics · Computer Science 2024-03-29 Elisa Tonello , Loïc Paulevé

Methods for reconstructing the topology of complex networks from time-resolved observations of node dynamics are gaining relevance across scientific disciplines. Of biggest practical interest are methods that make no assumptions about…

In this paper we consider the problem of controlling a limited number of target nodes of a network. Equivalently, we can see this problem as controlling the target variables of a structured system, where the state variables of the system…

Systems and Control · Computer Science 2019-08-29 Christian Commault , Jacob van der Woude , Paolo Frasca

This study investigates the infinite-horizon optimal control problem for switched Boolean control networks with an average-cost criterion. A primary challenge of this problem is the prohibitively high computational cost when dealing with…

Systems and Control · Electrical Eng. & Systems 2020-07-14 Shuhua Gao , Changkai Sun , Cheng Xiang , Kairong Qin , Tong Heng Lee

In this paper, we investigate optimal control of network-coupled subsystems where the dynamics and the cost couplings depend on an underlying undirected weighted graph. The graph coupling matrix in the dynamics may be the adjacency matrix,…

Systems and Control · Electrical Eng. & Systems 2021-11-05 Shuang Gao , Aditya Mahajan

This paper investigates the stabilization of probabilistic Boolean networks (PBNs) via a novel pinning control strategy based on network structure. In a PBN, the evolution equation of each gene switches among a collection of candidate…

Systems and Control · Electrical Eng. & Systems 2020-10-26 Lin Lin , Jinde Cao , Jianquan Lu , Jie Zhong

This paper focuses on proposing a general control framework for large-scale Boolean networks (\texttt{BNs}). Only by the network structure, the concept of structural controllability for \texttt{BNs} is formalized. A necessary and sufficient…

Systems and Control · Electrical Eng. & Systems 2021-05-27 Shiyong Zhu , Jianquan Lu , Shun-ichi Azuma , Wei Xing Zheng

In this article, we design the distributed pinning controllers to globally stabilize a Boolean network (BN), specially a sparsely connected large-scale one, towards a preassigned subset of state space through the node-to-node message…

Systems and Control · Electrical Eng. & Systems 2022-03-16 Shiyong Zhu , Jianquan Lu , Liangjie Sun , Jinde Cao

We consider the problem of a dynamical network whose dynamics is subject to external perturbations (`attacks') locally applied at a subset of the network nodes. We assume that the network has an ability to defend itself against attacks with…

Systems and Control · Computer Science 2018-06-13 Ishan Kafle , Sudarshan Bartaula , Afroza Shirin , Isaac Klickstein , Pankaz Das , Francesco Sorrentino

We study experimentally the synchronization patterns in time-delayed directed Boolean networks of excitable systems. We observe a transition in the network dynamics when the refractory time of the individual systems is adjusted. When the…

Adaptation and Self-Organizing Systems · Physics 2013-03-07 David P. Rosin , Damien Rontani , Daniel J. Gauthier , Eckehard Schöll

In this paper, we analyse large random Boolean networks in terms of a constraint satisfaction problem. We first develop an algorithmic scheme which allows to prune simple logical cascades and under-determined variables, returning thereby…

Statistical Mechanics · Physics 2009-11-11 L. Correale , M. Leone , A. Pagnani , M. Weigt , R. Zecchina

In the classical control of network systems, the control actions on a node are determined as a function of the states of all nodes in the network. Motivated by applications where the global state cannot be reconstructed in real time due to…

Systems and Control · Electrical Eng. & Systems 2025-01-09 Aleksandar Haber , Ferenc Molnar , Adilson E. Motter

In this paper we consider complex dynamical networks modeled by means of state space systems running in discrete time. We assume that the dependency structure of the variables within the (nonlinear) network equations is known and use…

Optimization and Control · Mathematics 2017-03-27 Jacob van der Woude

A large variety of dynamical systems, such as chemical and biomolecular systems, can be seen as networks of nonlinear entities. Prediction, control, and identification of such nonlinear networks require knowledge of the state of the system.…

Optimization and Control · Mathematics 2018-06-27 Aleksandar Haber , Ferenc Molnar , Adilson E. Motter

This paper studies the problem of selecting a minimum-size set of input nodes to guarantee stability of a networked system in the presence of uncertainties and time delays. Current approaches to input selection in networked dynamical…

Optimization and Control · Mathematics 2017-12-13 Zhipeng Liu , Yao Long , Andrew Clark , Phillip Lee , Linda Bushnell , Daniel Kirschen , Radha Poovendran

In this paper, we consider a population of individuals who have actions and opinions, which coevolve, mutually influencing one another on a complex network structure. In particular, we formulate a control problem for this social network, in…

Systems and Control · Electrical Eng. & Systems 2026-05-12 Roberta Raineri , Mengbin Ye , Lorenzo Zino

Models of biochemical networks are frequently high-dimensional and complex. Reduction methods that preserve important dynamical properties are therefore essential in their study. Interactions between the nodes in such networks are…

Molecular Networks · Quantitative Biology 2013-08-23 Alan Veliz-Cuba , Ajit Kumar , Kresimir Josic

This paper studies the controllability backbone problem in dynamical networks defined over graphs. The main idea of the controllability backbone is to identify a small subset of edges in a given network such that any subnetwork containing…

Systems and Control · Electrical Eng. & Systems 2023-09-07 Obaid Ullah Ahmad , Waseem Abbas , Mudassir Shabbir

The heterogeneous structure implies that a very few nodes may play the critical role in maintaining structural and functional properties of a large-scale network. Identifying these vital nodes is one of the most important tasks in network…

Physics and Society · Physics 2020-02-14 Yong Yu , Ming Jing , Na Zhao , Tao Zhou

The study of the interplay between the structure and dynamics of complex multilevel systems is a pressing challenge nowadays. In this paper, we use a semi-annealed approximation to study the stability properties of Random Boolean Networks…

Physics and Society · Physics 2012-10-31 Emanuele Cozzo , Alex Arenas , Yamir Moreno
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