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We introduce a novel class of explicit feature maps based on topological indices that represent each graph by a compact feature vector, enabling fast and interpretable graph classification. Using radial basis function kernels on these…

Machine Learning · Computer Science 2025-09-23 Adam Wesołowski , Ronin Wu , Karim Essafi

Motivated by chemical applications, we revisit and extend a family of positive definite kernels for graphs based on the detection of common subtrees, initially proposed by Ramon et al. (2003). We propose new kernels with a parameter to…

Quantitative Methods · Quantitative Biology 2016-08-16 Pierre Mahé , Jean-Philippe Vert

The chain graph model admits both undirected and directed edges in one graph, where symmetric conditional dependencies are encoded via undirected edges and asymmetric causal relations are encoded via directed edges. Though frequently…

Methodology · Statistics 2024-01-29 Ruixuan Zhao , Haoran Zhang , Junhui Wang

The theoretical notions of graph classes with bounded expansion and that are nowhere dense are meant to capture structural sparsity of real world networks that can be used to design efficient algorithms. In the area of sparse graphs, the…

Data Structures and Algorithms · Computer Science 2018-11-20 Wojciech Nadara

This paper deals with dynamical networks for which the relations between node signals are described by proper transfer functions and external signals can influence each of the node signals. We are interested in graph-theoretic conditions…

Optimization and Control · Mathematics 2019-12-02 Henk J. van Waarde , Pietro Tesi , M. Kanat Camlibel

Generalization and approximation capabilities of message passing graph neural networks (MPNNs) are often studied by defining a compact metric on a space of input graphs under which MPNNs are H\"older continuous. Such analyses are of two…

Machine Learning · Computer Science 2026-02-10 Ofek Amran , Tom Gilat , Ron Levie

In this paper we offer a metric similar to graph edit distance which measures the distance between two (possibly infinite)weighted graphs with finite norm (we define the norm of a graph as the sum of absolute values of its edges). The main…

Metric Geometry · Mathematics 2009-06-16 Hamed Daneshpajouh , Hamid Reza Daneshpajouh , Farzad Didehvar

In this paper, we introduce a generalization of graphlets to heterogeneous networks called typed graphlets. Informally, typed graphlets are small typed induced subgraphs. Typed graphlets generalize graphlets to rich heterogeneous networks…

Social and Information Networks · Computer Science 2020-10-28 Ryan A. Rossi , Nesreen K. Ahmed , Aldo Carranza , David Arbour , Anup Rao , Sungchul Kim , Eunyee Koh

We introduce a new graph-theoretic concept in the area of network monitoring. A set $M$ of vertices of a graph $G$ is a \emph{distance-edge-monitoring set} if for every edge $e$ of $G$, there is a vertex $x$ of $M$ and a vertex $y$ of $G$…

Data Structures and Algorithms · Computer Science 2022-09-26 Florent Foucaud , Shih-Shun Kao , Ralf Klasing , Mirka Miller , Joe Ryan

We present the first linear time complexity randomized algorithms for unbiased approximation of the celebrated family of general random walk kernels (RWKs) for sparse graphs. This includes both labelled and unlabelled instances. The…

Machine Learning · Computer Science 2024-10-16 Krzysztof Choromanski , Isaac Reid , Arijit Sehanobish , Avinava Dubey

A set $D$ of vertices in a graph $G$ is a dominating set if every vertex of $G$, which is not in $D$, has a neighbor in $D$. A set of vertices $D$ in $G$ is convex (respectively, isometric), if all vertices in all shortest paths…

Combinatorics · Mathematics 2017-04-28 Boštjan Brešar , Tanja Gologranc , Tim Kos

Embedding networks into a fixed dimensional feature space, while preserving its essential structural properties is a fundamental task in graph analytics. These feature vectors (graph descriptors) are used to measure the pairwise similarity…

Databases · Computer Science 2020-02-20 Zohair Raza Hassan , Mudassir Shabbir , Imdadullah Khan , Waseem Abbas

The threshold network model is a type of finite random graphs. In this paper, we introduce a generalized threshold network model. A pair of vertices with random weights is connected by an edge when real-valued functions of the pair of…

Probability · Mathematics 2010-10-12 Yusuke Ide , Norio Konno , Naoki Masuda

We generalize subgraph densities, arising in dense graph limit theory, to Markov spaces (symmetric measures on the square of a standard Borel space). More generally, we define an analogue of the set of homomorphisms in the form of a measure…

Probability · Mathematics 2023-11-13 Dávid Kunszenti-Kovács , László Lovász , Balázs Szegedy

In 1985, Golumbic and Scheinerman established an equivalence between comparability graphs and containment graphs, graphs whose vertices represent sets, with edges indicating set containment. A few years earlier, McMorris and Zaslavsky…

Combinatorics · Mathematics 2025-03-31 Ketai Chen , Jared DeLeo , Owen Henderschedt

We extend the concept of the law of a finite graph to graphings, which are, in general, infinite graphs whose vertices are equipped with the structure of a probability space. By doing this, we obtain a vast array of new unimodular measures.…

Combinatorics · Mathematics 2012-03-13 Igor Artemenko

A prominent tool in many problems involving metric spaces is a notion of randomized low-diameter decomposition. Loosely speaking, $\beta$-decomposition refers to a probability distribution over partitions of the metric into sets of low…

Data Structures and Algorithms · Computer Science 2016-09-29 Lior Kamma , Robert Krauthgamer

This work proposes a framework LGKDE that learns kernel density estimation for graphs. The key challenge in graph density estimation lies in effectively capturing both structural patterns and semantic variations while maintaining…

Machine Learning · Computer Science 2026-05-27 Xudong Wang , Ziheng Sun , Chris Ding , Jicong Fan

We extend the $L^p$ theory of sparse graph limits, which was introduced in a companion paper, by analyzing different notions of convergence. Under suitable restrictions on node weights, we prove the equivalence of metric convergence,…

Combinatorics · Mathematics 2018-02-06 Christian Borgs , Jennifer T. Chayes , Henry Cohn , Yufei Zhao

In this paper, we present several density-type theorems which show how to find a copy of a sparse bipartite graph in a graph of positive density. Our results imply several new bounds for classical problems in graph Ramsey theory and improve…

Combinatorics · Mathematics 2007-11-12 Jacob Fox , Benny Sudakov
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