English
Related papers

Related papers: On the Approximation Ratio of Ordered Parsings

200 papers

Mauer et al. [A Lempel-Ziv-style Compression Method for Repetitive Texts, PSC 2017] proposed a hybrid text compression method called LZ-LFS which has both features of Lempel-Ziv 77 factorization and longest first substitution. They showed…

Data Structures and Algorithms · Computer Science 2018-06-14 Akihiro Nishi , Yuto Nakashima , Shunsuke Inenaga , Hideo Bannai , Masayuki Takeda

In the Shortest-Superstring problem, we are given a set of strings S and want to find a string that contains all strings in S as substrings and has minimum length. This is a classical problem in approximation and the best known…

Data Structures and Algorithms · Computer Science 2016-11-11 Marcin Mucha

Motivated by the imminent growth of massive, highly redundant genomic databases, we study the problem of compressing a string database while simultaneously supporting fast random access, substring extraction and pattern matching to the…

Data Structures and Algorithms · Computer Science 2012-11-01 Travis Gagie , Paweł Gawrychowski , Christopher Hoobin , Simon J. Puglisi

We present an algorithm that computes the Lempel-Ziv decomposition in $O(n(\log\sigma + \log\log n))$ time and $n\log\sigma + \epsilon n$ bits of space, where $\epsilon$ is a constant rational parameter, $n$ is the length of the input…

Data Structures and Algorithms · Computer Science 2015-06-09 Dmitry Kosolobov

Given a sufficient statistic for a parametric family of distributions, one can estimate the parameter without access to the data. However, the memory or code size for storing the sufficient statistic may nonetheless still be prohibitive.…

Information Theory · Computer Science 2017-11-17 Masahito Hayashi , Vincent Y. F. Tan

We study sublinear time algorithms for estimating the size of maximum matching in graphs. Our main result is a $(\frac{1}{2}+\Omega(1))$-approximation algorithm which can be implemented in $O(n^{1+\epsilon})$ time, where $n$ is the number…

Data Structures and Algorithms · Computer Science 2022-06-28 Soheil Behnezhad , Mohammad Roghani , Aviad Rubinstein , Amin Saberi

We prove the full equivalence between Assembly Theory (AT) and Shannon Entropy via a method based upon the principles of statistical compression renamed `assembly index' that belongs to the LZ family of popular compression algorithms (ZIP,…

Information Theory · Computer Science 2024-04-04 Felipe S. Abrahão , Santiago Hernández-Orozco , Narsis A. Kiani , Jesper Tegnér , Hector Zenil

We propose a new representation of the offsets of the Lempel-Ziv (LZ) factorization based on the co-lexicographic order of the processed prefixes. The selected offsets tend to approach the k-th order empirical entropy. Our evaluations show…

Data Structures and Algorithms · Computer Science 2021-11-05 Dominik Köppl , Gonzalo Navarro , Nicola Prezza

We show that both the Lempel Ziv 77- and the 78-factorization of a text of length $n$ on an integer alphabet of size $\sigma$ can be computed in $O(n \lg \lg \sigma)$ time (linear time if we allow randomization) using $O(n \lg \sigma)$ bits…

Data Structures and Algorithms · Computer Science 2016-05-31 Dominik Köppl , Kunihiko Sadakane

We present an algorithm which computes the Lempel-Ziv factorization of a word $W$ of length $n$ on an alphabet $\Sigma$ of size $\sigma$ online in the following sense: it reads $W$ starting from the left, and, after reading each $r =…

Data Structures and Algorithms · Computer Science 2012-12-03 Tatiana Starikovskaya

In this paper we present a really simple linear-time algorithm constructing a context-free grammar of size O(g log (N/g)) for the input string, where N is the size of the input string and g the size of the optimal grammar generating this…

Data Structures and Algorithms · Computer Science 2014-03-19 Artur Jeż

This thesis concerns sequential-access data compression, i.e., by algorithms that read the input one or more times from beginning to end. In one chapter we consider adaptive prefix coding, for which we must read the input character by…

Information Theory · Computer Science 2009-02-03 Travis Gagie

We study the fundamental limits of matching pursuit, or the pure greedy algorithm, for approximating a target function $ f $ by a linear combination $f_n$ of $n$ elements from a dictionary. When the target function is contained in the…

Machine Learning · Statistics 2024-07-24 Jason M. Klusowski , Jonathan W. Siegel

From the output produced by a memoryless deletion channel from a uniformly random input of known length $n$, one obtains a posterior distribution on the channel input. The difference between the Shannon entropy of this distribution and that…

Information Theory · Computer Science 2018-08-01 Arash Atashpendar , David Mestel , A. W. Roscoe , Peter Y. A. Ryan

The Sliding Window Lempel-Ziv (SWLZ) algorithm has been studied from various perspectives in information theory literature. In this paper, we provide a general law which defines the asymptotics of match length for stationary and ergodic…

Information Theory · Computer Science 2013-05-21 Siddharth Jain , Rakesh Kumar Bansal

We propose a new approach for calculating the Lempel-Ziv factorization of a string, based on run length encoding (RLE). We present a conceptually simple off-line algorithm based on a variant of suffix arrays, as well as an on-line algorithm…

Data Structures and Algorithms · Computer Science 2015-03-20 Jun'ichi Yamamoto , Hideo Bannai , Shunsuke Inenaga , Masayuki Takeda

We investigate how to measure and define the entropy of a simple chaotic system, three hard spheres on a ring. A novel approach is presented, which does not assume the ergodic hypothesis. It consists of transforming the particles collision…

Computational Physics · Physics 2023-05-08 Matej Vedak , Graeme J Ackland

The Sliding Window Lempel-Ziv (SWLZ) algorithm that makes use of recurrence times and match lengths has been studied from various perspectives in information theory literature. In this paper, we undertake a finer study of these quantities…

Information Theory · Computer Science 2016-11-17 Siddharth Jain , R. K. Bansal

How hard is it guess a password? Massey showed that that the Shannon entropy of the distribution from which the password is selected is a lower bound on the expected number of guesses, but one which is not tight in general. In a series of…

Information Theory · Computer Science 2013-02-12 Mark M. Christiansen , Ken R. Duffy

We prove several results on linear codes achieving list-recovery capacity. We show that random linear codes achieve list-recovery capacity with constant output list size (independent of the alphabet size and length). That is, over alphabets…

Information Theory · Computer Science 2025-03-03 Ray Li , Nikhil Shagrithaya