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Experimental studies of cell motility in culture have shown that under adequate conditions these living organisms possess the ability to organize themselves into complex structures. Such structures may exhibit a synergy that greatly…

Statistical Mechanics · Physics 2021-10-27 G. Nakamura , M. Badoual , E. Fabiani , C. Deroulers

Phase separation can drive spatial organization of multicomponent mixtures. For instance in developing animal embryos, effective phase separation descriptions have been used to account for the spatial organization of different tissue types.…

Soft Condensed Matter · Physics 2023-01-18 Simon Gsell , Matthias Merkel

There are rich emergent phase behaviors in non-equilibrium active systems. Flocking and clustering are two representative dynamic phases. The relationship between these two phases is still unclear. In the paper, we numerically investigate…

Soft Condensed Matter · Physics 2023-08-09 Lu Chen , Bokai Zhang , Z. C. Tu

We extend a model for the morphology and dynamics of a crawling eukaryotic cell to describe cells on micropatterned substrates. This model couples cell morphology, adhesion, and cytoskeletal flow in response to active stresses induced by…

Cell Behavior · Quantitative Biology 2015-06-17 Brian A. Camley , Yanxiang Zhao , Bo Li , Herbert Levine , Wouter-Jan Rappel

Embryonic development involves pattern formation characterized by the emergence of spatially localized domains characterized by distinct cell fates resulting from differential gene expression. The boundaries demarcating these domains are…

Tissues and Organs · Quantitative Biology 2024-06-11 Chandrashekar Kuyyamudi , Shakti N. Menon , Sitabhra Sinha

Prestellar cores are generally spheroidal, some of which appear oblate while others appear prolate. Very few of them appear circular in projection. Little, however, is understood about the processes or the physical conditions under which…

Astrophysics of Galaxies · Physics 2022-04-13 S. Anathpindika , J. Di Francesco

After the introduction of sandpile model a number of different variants have been studied. In most of these models sand particles are indistinguishable. Here we have painted the sand particles using a few distinct colors, and restrict them…

Statistical Mechanics · Physics 2025-08-15 S. S. Manna

We investigate general aspects of molecular line formation under conditions which are typical of prestellar cores. Focusing on simple linear molecules, we study formation of their rotational lines by radiative transfer simulations. We…

Astrophysics · Physics 2009-11-13 Ya. Pavlyuchenkov , D. Wiebe , B. Shustov , Th. Henning , R. Launhardt , D. Semenov

We investigate through computational simulations with a pore network model the formation of patterns caused by erosion-deposition mechanisms. In this model, the geometry of the pore space changes dynamically as a consequence of the coupling…

Computational Physics · Physics 2009-11-13 D. O. Maionchi , A. F. Morais , R. N. Costa Filho , J. S. Andrade , H. J. Herrmann

Diffusionless phase transitions are at the core of the multifunctionality of (magnetic) shape memory alloys, ferroelectrics and multiferroics. Giant strain effects under external fields are obtained in low symmetric modulated martensitic…

In this study, we introduce a minimal model for a collection of polar self-propelled particles (SPPs) on a two-dimensional substrate where each particle has a different ability to interact with its neighbours. The SPPs interact through a…

Statistical Mechanics · Physics 2021-02-02 Jay Prakash Singh , Sudipta Pattanayak , Shradha Mishra

Shapes of biological membranes are dynamically regulated in living cells. Although membrane shape deformation by proteins at thermal equilibrium has been extensively studied, nonequilibrium dynamics have been much less explored. Recently,…

Biological Physics · Physics 2020-11-19 Naoki Tamemoto , Hiroshi Noguchi

The interstellar medium is threaded by a hierarchy of filaments from large scales (~ 100 pc) to small scales (~ 0.1pc). The masses and lengths of these nested structures may reveal important constraints for cloud formation and evolution,…

Astrophysics of Galaxies · Physics 2024-02-09 Jiancheng Feng , Rowan J. Smith , Alvaro Hacar , Susan E. Clark , Daniel Seifried

Granular materials are ubiquitous in nature and industry; their mechanical behavior has been of academic and engineering interest for centuries. One of the reasons for their rather complex mechanical behavior is that stresses exerted on a…

Soft Condensed Matter · Physics 2024-03-26 Chandan Shakya , Jasper van der Gucht , Joshua A. Dijksman

The fragmentation of filaments in molecular clouds has attracted a lot of attention as there seems to be a relation between the evolution of filaments and star formation. The study of the fragmentation process has been motivated by simple…

Astrophysics of Galaxies · Physics 2018-03-07 R. -A. Chira , J. Kainulainen , J. C. Ibàñez-Mejía , Th. Henning , M. -M. Mac Low

Rapid advance of experimental techniques provides an unprecedented in-depth view into complex developmental processes. Still, little is known on how the complexity of multicellular organisms evolved by elaborating developmental programs and…

Molecular Networks · Quantitative Biology 2021-07-16 Somya Mani , Tsvi Tlusty

Filaments are considered to be basic structures and molecular clouds consist of filaments. Filaments are often observed as extending in the direction perpendicular to the interstellar magnetic field. The structure of filaments has been…

Astrophysics of Galaxies · Physics 2015-05-13 Kohji Tomisaka

Many technologically useful materials are polycrystals composed of a myriad of small monocrystalline grains separated by grain boundaries. Dynamics of grain boundaries play a crucial role in determining the grain structure and defining the…

Materials Science · Physics 2021-07-07 Katayun Barmak , Anastasia Dunca , Yekaterina Epshteyn , Chun Liu , Masashi Mizuno

Search for possible relationships between phylogeny and ontogeny is one of the most important issues in the field of evolutionary developmental biology. By representing developmental dynamics of spatially located cells with gene expression…

Populations and Evolution · Quantitative Biology 2015-04-01 Takahiro Kohsokabe , Kunihiko Kaneko

In nature, microorganisms must often cope with hostile environmental conditions. To do so they have developed sophisticated cooperative behavior and intricate communication capabilities, such as: direct cell-cell physical interactions via…

Condensed Matter · Physics 2007-05-23 Eshel Ben-Jacob , Inon Cohen , Ido Golding , Yonathan Kozlovsky