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Effective organismal behavior responds appropriately to changes in the surrounding environment. Attaining this delicate balance of sensitivity and stability is a hallmark of the animal kingdom. By studying the locomotory behavior of a…

Biological Physics · Physics 2021-07-08 Matthew S. Bull , Vivek N. Prakash , Manu Prakash

We report a noise induced delay of bifurcation in a simple pulse-coupled neural circuit. We study the behavior of two neural oscillators, each individually governed by saddle-node dynamics, with reciprocal excitatory synaptic connections.…

Biological Physics · Physics 2007-05-23 Boris Gutkin , Tim Hely , Juergen Jost

Infectious diseases often involve multiple strains that interact through the immune response generated after an infection. This study investigates the conditions under which a two-strain epidemic model with partial cross-immunity can lead…

Populations and Evolution · Quantitative Biology 2024-12-11 Nir Gavish

A lipid coated bubble (LCB) oscillator is a very interesting non-smooth oscillator with many important applications ranging from industry and chemistry to medicine. However, due to the complex behavior of the coating intermixed with the…

Fluid Dynamics · Physics 2021-07-28 AJ Sojahrood , H. Haghi , T. M. Porter , R. Karshafian , M. C. Kolios

Spatiotemporal patterns are common in biological systems. For electrically-coupled cells previous studies of pattern formation have mainly used external forcing as the main bifurcation parameter. The purpose of this paper is to show that…

Dynamical Systems · Mathematics 2021-11-02 H. O. Fatoyinbo , R. G. Brown , D. J. W. Simpson , B. van Brunt

We study a mechanism for reliable switching in biomolecular signal-transduction cascades. Steady bistable states are created by system-size cooperative effects in populations of proteins, in spite of the fact that the phosphorylation-state…

Subcellular Processes · Quantitative Biology 2015-05-30 Eric Smith , Supriya Krishnamurthy , Walter Fontana , David Krakauer

The apparent stability of population oscillations in ecological systems is a long-standing puzzle. A generic solution for this problem is suggested here. The stabilizing mechanism involves the combined effect of spatial migration,…

Populations and Evolution · Quantitative Biology 2007-05-23 Refael Abta , Marcelo Schiffer , Avishag Ben-Ishay , Nadav M. Shnerb

Oscillations arise in many real-world systems and are associated with both functional and dysfunctional states. Whether a network can oscillate can be estimated if we know the strength of interaction between nodes. But in real-world…

Neurons and Cognition · Quantitative Biology 2023-11-16 Jie Zang , Shenquan Liu , Pascal Helson , Arvind Kumar

Oscillations are observed in all branches of science and culture, ranging from the behavior of ele-mentary particles, atoms, molecules in simple chemical or physical systems or even in complex organisms, up to oscillations of the behavior…

Physics and Society · Physics 2023-09-27 Joachim Maier

Many real-world systems can be modeled as networks of interacting oscillatory units. Collective dynamics that are of functional relevance for the oscillator network, such as switching between metastable states, arise through the interplay…

Dynamical Systems · Mathematics 2019-08-05 Christian Bick

We present a one dimensional model for the nonlinear response of a colloidal crystal to intense light illumination along a high symmetry direction. The strong coupling between light and the colloidal lattice, via the electric gradient force…

Condensed Matter · Physics 2009-10-30 E. Lidorikis , Qiming Li , C. M. Soukoulis

We consider the long-time dynamics of a general class of nonlinear Fokker-Planck equations, describing the large population behavior of mean-field interacting units. The main motivation of this work concerns the case where the individual…

Analysis of PDEs · Mathematics 2020-01-08 Eric Lucon , Christophe Poquet

Noise-induced transitions between metastable fixed points in systems evolving on multiple time scales are analyzed in situations where the time scale separation gives rise to a slow manifold with bifurcation. This analysis is performed…

Statistical Mechanics · Physics 2017-10-05 Tobias Grafke , Eric Vanden-Eijnden

Emergent nonreciprocity in active matter drives the formation of self-organized states that transcend the behaviors of equilibrium systems. Integrating experiments, theory and simulations, we demonstrate that active solids composed of…

Single and collective cellular oscillations involving the actomyosin cytoskeleton have been observed in numerous biological systems. We show here that a generic model of a contractile material, which is turning over and contracts against an…

Biological Physics · Physics 2014-02-24 Kai Dierkes , Angughali Sumi , Jérôme Solon , Guillaume Salbreux

We report the phenomenon of vibrational resonance in a single species and a two species models of groundwater-dependent plant ecosystems with a biharmonic oscillation (with two widely different frequencies \omega and \Omega, \Omega >>…

Chaotic Dynamics · Physics 2013-04-16 C. Jeevarathinam , S. Rajasekar , Miguel A. F. Sanjuan

The author investigates the onset of patterns in vertically oscillated layers of dissipative particles using numerical solutions of continuum equations to Navier-Stokes order. Above a critical accelerational amplitude of the cell, standing…

Soft Condensed Matter · Physics 2010-03-12 J. Bougie

We analyze a simple stochastic model to describe motor molecules which cooperate in large groups and present a physical mechanism which can lead to oscillatory motion if the motors are elastically coupled to their environment. Beyond a…

Soft Condensed Matter · Physics 2009-10-28 Frank Julicher , Jacques Prost

We show that at the onset of a cyclic fold bifurcation, a birhythmic medium composed of glycolytic oscillators displays turbulent dynamics. By computing the largest Lyapunov exponent, the spatial correlation function, and the average…

Subcellular Processes · Quantitative Biology 2009-11-10 Dorjsuren Battogtokh , John J. Tyson

A simple model of oscillator chain with dynamical traps and additive white noise is considered. Its dynamics was studied numerically. As demonstrated, when the trap effect is pronounced nonequilibrium phase transitions of a new type arise.…

Statistical Mechanics · Physics 2009-11-10 Ihor Lubashevsky , Reinhard Mahnke , Morteza Hajimahmoodzadeh , Albert Katsnelson