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Artificial Neural Networks (ANN) are already heavily involved in methods and applications for frequent tasks in the field of computational chemistry such as representation of potential energy surfaces (PES) and spectroscopic predictions.…

Chemical Physics · Physics 2022-12-23 Silvan Käser , Luis Itza Vazquez-Salazar , Markus Meuwly , Kai Töpfer

The computational prediction of the structure and stability of hybrid organic-inorganic interfaces provides important insights into the measurable properties of electronic thin film devices, coatings, and catalyst surfaces and plays an…

The interpolation of high-dimensional potential energy surfaces (PESs) is commonly done with physically-inspired deep-neural network models. In this work, we illustrate that Gaussian Processes (GPs) are also capable of interpolating…

Chemical Physics · Physics 2021-09-30 Rodrigo A. Vargas-Hernández , Jake R. Gardner

Whilst the primary bottleneck to a number of computational workflows was not so long ago limited by processing power, the rise of machine learning technologies has resulted in a paradigm shift which places increasing value on issues related…

Machine learning has transformed the field of atomistic simulations by enabling the development of interatomic potentials that are computationally efficient and highly accurate. These advances have opened the door to modeling molecular…

Chemical Physics · Physics 2026-05-22 Nitik Bhatia , Ondrej Krejci , Patrick Rinke

We calculate the two, three, four, and five-body (state independent) effective potentials between the centers of mass (CM) of self avoiding walk polymers by Monte-Carlo simulations. For full overlap, these coarse-grained n-body interactions…

Soft Condensed Matter · Physics 2009-11-07 P. G. Bolhuis , A. A. Louis , J. P. Hansen

Recent advancements in equivariant deep models have shown promise in accurately predicting atomic potentials and force fields in molecular dynamics simulations. Using spherical harmonics (SH) and tensor products (TP), these equivariant…

Machine Learning · Computer Science 2024-11-08 Zhao Xu , Haiyang Yu , Montgomery Bohde , Shuiwang Ji

The connection between fundamental interactions acting in molecules in a fluid and macroscopically measured properties, such as the viscosity between colloidal particles coated with polymers, is studied here. The role that hydrodynamic and…

Soft Condensed Matter · Physics 2015-09-02 A. Gama Goicochea , M. A. Balderas Altamirano , R. Lopez-Esparza , M. A. Waldo , E. Perez

Transition intensities for small molecules such as water and CO$_2$ can now be computed with such high accuracy that they are being used to systematically replace measurements in standard databases. These calculations use high accuracy ab…

Relativistic third-order MBPT is applied to obtain energies of ions with two valence electrons in the no virtual-pair approximation (NVPA). A total of 302 third-order Goldstone diagrams are organized into 12 one-body and 23 two-body terms.…

Atomic Physics · Physics 2009-11-11 H. C. Ho , W. R. Johnson , S. A. Blundell , M. S. Safronova

We present a simple and general way to accurately describe long-range interactions between atoms and molecules through combining neural networks with physical models. Demonstrations on the H$_3$, Li$_3$ and 2KRb systems illustrate the…

Atomic Physics · Physics 2024-02-27 Yingyue Hong , Jiayu Huang , Dong H. Zhang

Machine learning (ML) has become widely used in the development of interatomic potentials for molecular dynamics simulations. However, most ML potentials are still much slower than classical interatomic potentials and are usually trained…

Materials Science · Physics 2024-08-29 Aslak Fellman , Jesper Byggmästar , Fredric Granberg , Kai Nordlund , Flyura Djurabekova

Physics-Informed Neural Networks (PINNs) integrate physical principles into machine learning, finding wide applications in various science and engineering fields. However, solving nonlinear hyperbolic partial differential equations (PDEs)…

Fluid Dynamics · Physics 2024-10-01 Jingjing Zhang , Ulisses Braga-Neto , Eduardo Gildin

Many-body perturbation theory (MBPT) based on Green's functions and Feynman diagrams provides a fundamental theoretical framework for various \emph{ab initio} computational approaches in molecular and materials science, including the random…

Quantum Physics · Physics 2025-03-20 Yuqi Wang , Wei-Hai Fang , Zhendong Li

Compared with global average pooling in existing deep convolutional neural networks (CNNs), global covariance pooling can capture richer statistics of deep features, having potential for improving representation and generalization abilities…

Computer Vision and Pattern Recognition · Computer Science 2020-08-12 Qilong Wang , Jiangtao Xie , Wangmeng Zuo , Lei Zhang , Peihua Li

Artificial neural network (ANN) potentials enable highly accurate atomistic simulations of complex materials at unprecedented scales. Despite their promise, training ANN potentials to represent intricate potential energy surfaces (PES) with…

Disordered Systems and Neural Networks · Physics 2025-11-11 In Won Yeu , Annika Stuke , Jon L. pez-Zorrilla , James M. Stevenson , David R. Reichman , Richard A. Friesner , Alexander Urban , Nongnuch Artrith

Numerical methods are proposed for an advanced Poisson-Nernst-Planck-Fermi (PNPF) model for studying ion transport through biological ion channels. PNPF contains many more correlations than most models and simulations of channels, because…

Biomolecules · Quantitative Biology 2015-06-22 Jinn-Liang Liu , Bob Eisenberg

Force-matched water models provide a practical route from first-principles reference data to long classical and path-integral molecular simulations. Previous flexible four-site potentials in the spirit of q-TIP4P/F showed that fitting…

Chemical Physics · Physics 2026-05-26 Jan Kessler , Thomas Spura , Kristof Karhan , Thomas D. Kühne

A comprehensive microscopic understanding of ambient liquid water is a major challenge for $ab$ $initio$ simulations as it simultaneously requires an accurate quantum mechanical description of the underlying potential energy surface (PES)…

Chemical Physics · Physics 2019-10-28 Hsin-Yu Ko , Linfeng Zhang , Biswajit Santra , Han Wang , Weinan E , Robert A. DiStasio , Roberto Car

Message passing neural networks have demonstrated significant efficacy in predicting molecular interactions. Introducing equivariant vectorial representations augments expressivity by capturing geometric data symmetries, thereby improving…

Machine Learning · Computer Science 2025-08-01 Zetian Mao , Chuan-Shen Hu , Jiawen Li , Chen Liang , Diptesh Das , Masato Sumita , Kelin Xia , Koji Tsuda