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Recent years have seen particular interest in using electronic medical records (EMRs) for secondary purposes to enhance the quality and safety of healthcare delivery. EMRs tend to contain large amounts of valuable clinical notes. Learning…
Clinical notes are text documents that are created by clinicians for each patient encounter. They are typically accompanied by medical codes, which describe the diagnosis and treatment. Annotating these codes is labor intensive and error…
Extracting dense representations for terms and phrases is a task of great importance for knowledge discovery platforms targeting highly-technical fields. Dense representations are used as features for downstream components and have multiple…
Implicit Neural Representations (INRs) have revolutionized signal representation by leveraging neural networks to provide continuous and smooth representations of complex data. However, existing INRs face limitations in capturing…
Automatic Compliance Checking (ACC) within the Architecture, Engineering, and Construction (AEC) sector necessitates automating the interpretation of building regulations to achieve its full potential. Converting textual rules into…
We investigate the potential benefit of incorporating dictionary information into a neural network architecture for natural language processing. In particular, we make use of this architecture to extract several concepts related to COVID-19…
The rising rate of drug-related deaths in the United States, largely driven by fentanyl, requires timely and accurate surveillance. However, critical overdose data are often buried in free-text coroner reports, leading to delays and…
ICD Coding aims to assign a wide range of medical codes to a medical text document, which is a popular and challenging task in the healthcare domain. To alleviate the problems of long-tail distribution and the lack of annotations of…
This paper investigates efficient methods for utilizing text-only data to improve speech recognition, focusing on encoder-dominated models that facilitate faster recognition. We provide a comprehensive comparison of techniques to integrate…
In recent years, word embeddings have been surprisingly effective at capturing intuitive characteristics of the words they represent. These vectors achieve the best results when training corpora are extremely large, sometimes billions of…
The electroencephalogram (EEG) offers a non-invasive means by which a listener's auditory system may be monitored during continuous speech perception. Reliable auditory-EEG decoders could facilitate the objective diagnosis of hearing…
Visual-language models have advanced the development of universal models, yet their application in medical imaging remains constrained by specific functional requirements and the limited data. Current general-purpose models are typically…
The clinical notes are usually typed into the system by physicians. They are typically required to be marked by standard medical codes, and each code represents a diagnosis or medical treatment procedure. Annotating these notes is time…
Decoding language from neural signals holds considerable theoretical and practical importance. Previous research has indicated the feasibility of decoding text or speech from invasive neural signals. However, when using non-invasive neural…
The Bidirectional Encoder Representations from Transformers (BERT) model has achieved the state-of-the-art performance for many natural language processing (NLP) tasks. Yet, limited research has been contributed to studying its…
Extracting table contents from documents such as scientific papers and financial reports and converting them into a format that can be processed by large language models is an important task in knowledge information processing. End-to-end…
ICD-9 coding is a relevant clinical billing task, where unstructured texts with information about a patient's diagnosis and treatments are annotated with multiple ICD-9 codes. Automated ICD-9 coding is an active research field, where CNN-…
Medical image captioning automatically generates a medical description to describe the content of a given medical image. A traditional medical image captioning model creates a medical description only based on a single medical image input.…
Understanding how the brain responds to sensory inputs is challenging: brain recordings are partial, noisy, and high dimensional; they vary across sessions and subjects and they capture highly nonlinear dynamics. These challenges have led…
We develop a functional encoder-decoder approach to supervised meta-learning, where labeled data is encoded into an infinite-dimensional functional representation rather than a finite-dimensional one. Furthermore, rather than directly…